| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3328 |
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| Symbol | |
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| ID | 4040163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3592027 |
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| End bp | 3593919 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978734 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_585469 |
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| Protein GI | 94312259 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.554418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTATGGT TACGCCTTTC CTGGCTTTCC GAATCCCGCT GTCCCATGTC GCGCGCCCTG
GCGATCCTCA AAGAAGTCTT CGGCTACCAC GCATTCCGCG GCCGGCAGGG CGAGATCATC
GACCACGTGG CCGAAGGCGG TGATTGCCTG GTGCTGATGC CGACCGGTGG CGGCAAGTCG
CTCTGCTACC AGATTCCCGC GCTGCTCCGG CAGCAGGCAG GCCACGGCGT GGGTATCGTC
GTATCGCCAC TGATCGCGCT GATGCAGGAT CAGGTCGCCG CACTGACGGA GGCGGGGGTT
CGCGCCGCGG TGCTCAACTC GACGCTGAGC AGCAGCGAGG CATCGGCAGT CGAGCGGGAC
CTGCTGGCGG GGCGGCTGGA TATCCTCTAT GTGGCGCCGG AGCGGCTGAT GACGCCGCGG
TTCCTCGATC TGCTCGAGCG GACACGCGTG GGTCTCTTTG CGATTGACGA AGCGCATTGC
GTATCGCAAT GGGGACATGA CTTCCGGCCC GAGTACATCC AGCTGTCGGT CCTGCACGAG
CGCTTTCCGC GTGTTCCGCG TATCGCCTTG ACGGCCACGG CCGATGCACT GACGCGCCAG
GAGATTGTCG AGCGTCTGGC GCTGGACGAG GCGAGCGTCT TCATCTCAAG CTTCGACCGC
CCCAATATCC GCTATCGGAT CATCGAAAAG GACAACGCCC GGCAGCAGTT GCTCGCGTTC
ATCAAGGCAG AGCACATGAA CGCGACTGGC GGGCACGACA GCGGCATTGT CTACTGCCTG
TCGCGCAAGA AGGTCGAGGA TACCGCAGCG TGGCTGTCCA GCCACGGCAT CAACGCGCTG
GGCTATCACG CCGGCATGGA CTCCCAGATT CGCCAGACGC ACCAGGCCCG ATTCCGCGAG
GAAGAAGGGA TCGTGATGGT AGCCACCATC GCTTTCGGCA TGGGTATCGA CAAGCCGGAC
GTACGCTTTG TGGCGCACCT GGACCTGCCC AAGAGCATGG AAGGGTACTA CCAGGAAACC
GGACGCGCGG GACGCGACGG CCTGCCCGCC AATGCATGGA TGGCATACGG GCTGGGCGAC
GTGGTGCAGC AGAAACGCAT GATCGACGAG TCGGAAGCGG ACGAGGCGCA CAAGCGCGTC
TCGTCGTCCA AGCTCGATGC CTTGCTGGGT TTGTGTGAAA CCGCTGGCTG CCGGCGTGTG
CGCATCCTGG CGTATTTCGA CGAGACGGCC GAGCCTTGTG GAAATTGCGA TACCTGCCTG
GAGCCACCTT CCACATGGGA TGGGACACGC GAGGCCCAGA TGGCGCTGTC GTGTGTCTAC
CGTATCGCGC AGGCGAGCCG CGTCTATTTT GGCGCCACAC ATCTGATCGA CGTGCTGCGT
GGCAATGCCA ACGAGAAGAT CCGGCAATGG GGGCATGACA AGGTGTCGAC GTTCGGCATC
GGCAAGGATC GCTCGGTATC CGAATGGCAC GCGATCTTCC GTCAGTTGAT CGCGCACGGG
CTTCTGGTCA TCGATCACGG TGGACACGGA GCGTTGCTGC TAGGCGATTC GGCGCGTGCC
GTGCTCAAGG GTGAGGAATT GATCACCCTG CGCCGCCAGG TCAGCAAGCC GGGCAAGTCC
GGCGACCGTG GCGCGCGCGG GGCGCGGATC GACCATACGG CGACGATGGA TGCCGACATG
CTGGCCAACT GGGAAGCGCT GCGCGGCTGG CGGACCACCA CGGCGCGCGA GCATGGCGTG
CCCGCCTATG TGATCTTCCA TGACGCCACG CTGGCGGAAC TGGCGCGCAG CGCACCCGAG
TCGCTCGATG AGCTGGCGGA AGTGCCCGGA ATCGGTGCGT CGAAACTCGA ACGCTACGGC
GAGGAAATCC TCGAAATCCT GCGCGCGGTC TGA
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| Protein sequence | MVWLRLSWLS ESRCPMSRAL AILKEVFGYH AFRGRQGEII DHVAEGGDCL VLMPTGGGKS
LCYQIPALLR QQAGHGVGIV VSPLIALMQD QVAALTEAGV RAAVLNSTLS SSEASAVERD
LLAGRLDILY VAPERLMTPR FLDLLERTRV GLFAIDEAHC VSQWGHDFRP EYIQLSVLHE
RFPRVPRIAL TATADALTRQ EIVERLALDE ASVFISSFDR PNIRYRIIEK DNARQQLLAF
IKAEHMNATG GHDSGIVYCL SRKKVEDTAA WLSSHGINAL GYHAGMDSQI RQTHQARFRE
EEGIVMVATI AFGMGIDKPD VRFVAHLDLP KSMEGYYQET GRAGRDGLPA NAWMAYGLGD
VVQQKRMIDE SEADEAHKRV SSSKLDALLG LCETAGCRRV RILAYFDETA EPCGNCDTCL
EPPSTWDGTR EAQMALSCVY RIAQASRVYF GATHLIDVLR GNANEKIRQW GHDKVSTFGI
GKDRSVSEWH AIFRQLIAHG LLVIDHGGHG ALLLGDSARA VLKGEELITL RRQVSKPGKS
GDRGARGARI DHTATMDADM LANWEALRGW RTTTAREHGV PAYVIFHDAT LAELARSAPE
SLDELAEVPG IGASKLERYG EEILEILRAV
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