| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3317 |
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| Symbol | rplC |
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| ID | 4040152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3580547 |
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| End bp | 3581191 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978723 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_585458 |
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| Protein GI | 94312248 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000449005 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTTG GCCTTGTAGG TCGCAAGGTT GGCATGACCC GTATTTTCAC GGACGACGGT
GATTCGATTC CCGTTACCGT GGTCGAGGTC GGCGACAACC GCGTGACGCA AATCAAGACG
GACGAGACCG ACGGTTACAC CGCCGTTCAA GTCACCTTTG GCAGCCGACG CGCAAGCCGC
GTTACCAAGC CGCTGGCGGG TCACCTCGCC AAAGCCGGTG TGGAAGCTGG CGAAGTCATC
AAAGAATTCC GCATCGATGC AGCCAAGGCT GCCGAGCTGC AAGCTGGCAG CTCGCTCTCC
GTCGACCTGT TCCAGGTTGG CCAGAAGATC GACGTGCAGG GCGTGAGCAT CGGTAAGGGC
TACGCCGGTA CCATCAAGCG CCACCACTTC GCATCGGGTC GTGCCACCCA CGGTAACTCG
CGTTCGCACA ACGTTCCGGG TTCCATCGGT ATGGCACAGG ATCCGGGCCG CGTGTTCCCG
GGCAAGCGCA TGACGGGTCA CCTGGGTGAC GCTACCCGCA CCGTGCAAAA CCTCGAGATC
GCCAAGATCG ACGCAGAGCG CAAGCTGCTG CTGGTCAAGG GCGCCATCCC CGGTTCCAAG
GGCGGCAAGG TCATCGTGAC CCCGGCCGTC AAGGCCAAAG CTTAA
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| Protein sequence | MSLGLVGRKV GMTRIFTDDG DSIPVTVVEV GDNRVTQIKT DETDGYTAVQ VTFGSRRASR
VTKPLAGHLA KAGVEAGEVI KEFRIDAAKA AELQAGSSLS VDLFQVGQKI DVQGVSIGKG
YAGTIKRHHF ASGRATHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHLGD ATRTVQNLEI
AKIDAERKLL LVKGAIPGSK GGKVIVTPAV KAKA
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