| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3297 |
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| Symbol | secY |
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| ID | 4040132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3570664 |
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| End bp | 3572007 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637978703 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_585438 |
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| Protein GI | 94312228 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCACGG CGAAACCCAA TGCAAGCGCG CAGGCCAGGA ACACGGCGAA GTACGGCGAC
CTCAAGCGCC GGTTGATGTT CCTGGTGCTG GCTTTGATCG TCTACCGCAT CGGTGCGCAT
ATTCCGGTGC CGGGGATTGA TCCGGACCAG CTTGCGAAGC TTTTCCAGTC TCAGTCAGGT
GGCATCCTCG GGATGTTTAA CCTGTTCTCG GGCGGTGCGC TGTCGCGCTT TACCGTCTTC
GCGCTCGGCA TCATGCCGTA CATCTCGGCG TCGATCATCA TGCAGTTGTT GACGATCGTG
CTGCCGCAGT TGGAGTCGTT GAAGAAGGAA GGGCAGGCAG GGCAACGCAA GATTACGCAG
TACACGCGTT ACGGCACTGT GGTTCTGGCC ACGTTCCAGG CGCTGTCGAT TGCGGTTGCG
CTGGAATCGC AGCCTGGTCT CGTGTTGGAA CCGGGTCTGA TGTTCCGGGC CACGGCGGTG
ATCACGCTGG TGACTGGCAC GATGTTCCTG ATGTGGCTGG GTGAACAGAT CACCGAGCGT
GGTCTGGGCA ACGGTATCTC GATCATCATC TTTGGCGGTA TCGCGGCGGG CTTGCCCAAT
GCGATTGGCG GACTGTTCGA ACTGGTCCGT ACGGGTTCCA TGAGCATCAT CGCGGCGATC
TTTATCGTGG CGATCATTGC GGGTGTGACC TTCGCCGTGG TGTTTATCGA GCGTGGCCAG
CGCAAGATTC TGGTGAACTA TGCCAAGCGT CAGGTCGGCA ACAAGGTGTA CGGCGGTCAG
TCGTCGCATC TGCCGCTGAA GCTGAACATG GCAGGGGTGA TTCCGCCGAT CTTTGCATCG
TCGATCATCC TGTTCCCGGC AACGATTGCG GGCTGGTTTA CGTCGGACTC GACGAGTGCG
GTGGGTCGGT TCATCAAGGA CCTGGCTGCC ACGCTGTCGC CGGGTCAGCC GGTGTACATC
CTGCTGTATG CAACTGCGAT TGTTTTCTTC TGCTTCTTCT ATACGGCTCT GGTGTACAAC
AGCCGGGAAG TGGCGGATAA CCTGAAAAAG AGTGGTGCCT TCATTCCGGG CATCCGTCCG
GGCGAGCAAA CGACGCGCTA TATCGACAAG ATCTTGGTGC GCCTGACGCT GGCTGGTGCG
ATTTACATCA CACTAGTCTG CCTGTTGCCG GAATTCCTGG TGCTGCGCTG GAACGTTCCG
TTCTATTTCG GCGGAACCTC GCTGCTGATC ATCGTGGTCG TCACGATGGA CTTCATGGCA
CAGGTACAGT CCTACGTCAT GTCGCAGCAG TATGAGTCGC TGCTGAAGAA GGCGAATTTC
AAGGGTAACC TGACCTTGCG TTAA
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| Protein sequence | MATAKPNASA QARNTAKYGD LKRRLMFLVL ALIVYRIGAH IPVPGIDPDQ LAKLFQSQSG
GILGMFNLFS GGALSRFTVF ALGIMPYISA SIIMQLLTIV LPQLESLKKE GQAGQRKITQ
YTRYGTVVLA TFQALSIAVA LESQPGLVLE PGLMFRATAV ITLVTGTMFL MWLGEQITER
GLGNGISIII FGGIAAGLPN AIGGLFELVR TGSMSIIAAI FIVAIIAGVT FAVVFIERGQ
RKILVNYAKR QVGNKVYGGQ SSHLPLKLNM AGVIPPIFAS SIILFPATIA GWFTSDSTSA
VGRFIKDLAA TLSPGQPVYI LLYATAIVFF CFFYTALVYN SREVADNLKK SGAFIPGIRP
GEQTTRYIDK ILVRLTLAGA IYITLVCLLP EFLVLRWNVP FYFGGTSLLI IVVVTMDFMA
QVQSYVMSQQ YESLLKKANF KGNLTLR
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