Gene Rmet_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3269 
Symbol 
ID4040104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3544665 
End bp3545204 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID637978675 
Productpilus assembly protein PilQ 
Protein accessionYP_585410 
Protein GI94312200 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCC TGACCCGACG CCCTCCCATG GCACTGCGCG CAGTGGCGGT TGCGGCATTG 
GCCGTTGTCG CCCTGGCCGG CTGCGGTGCA GGCGAGGATG AACACCTCCA GCAATGGATG
GCGCAGACGC GCGCGGCAAA GGTGCCGCCG CCCGAACCCT TGCCCGAGGT CAAGCCCTAC
GAGCCGCGCC AGTATGCAGG CACCAAATCT CCCGAGCCCT TCGCGCAGAC GAAGATCGGT
GAGTTGAACA AGGCGATGTC GGAGTCGCCG GAGGCCGGAC GGCGGCACGA GCCCCTTGAA
GACTATCCGT TGGAGAACTT CAAGATGCTC GGGATGCTGA AGAAGAACGG CGAGACCTAC
GGTGTCGTAC GCGTAGATAA CAAGATCCAT CACGTAAAGG TGGGTCAGTA TCTCGGCCAG
AACTATGGCC GGGTGGTCCG CATCACCGAT CAGGAGATCG TGCTGCGCGA ATTGGTCCGG
GAAGGGGTCT CAGAGTGGAA AGAGAAAATG ACCAGCCTGA AGCTGGAGGC ATCGGCATGA
 
Protein sequence
MSRLTRRPPM ALRAVAVAAL AVVALAGCGA GEDEHLQQWM AQTRAAKVPP PEPLPEVKPY 
EPRQYAGTKS PEPFAQTKIG ELNKAMSESP EAGRRHEPLE DYPLENFKML GMLKKNGETY
GVVRVDNKIH HVKVGQYLGQ NYGRVVRITD QEIVLRELVR EGVSEWKEKM TSLKLEASA