| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3267 |
|---|
| Symbol | aroK |
|---|
| ID | 4040102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3541717 |
|---|
| End bp | 3542406 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637978673 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_585408 |
|---|
| Protein GI | 94312198 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCACA ATGGCGTATG CATCACGCCC CTTGCGGGTT CCCGGCCTGA CGCGGGTGCC
CGCCGCCTTA TCGTGCAAGA CCTCAGTCCA GTGACAGCCA ATCGCCCGAA TATCTTCTTT
GTTGGCCTGA TGGGCGCCGG CAAGACCACC GTCGGCCGCA CCGTGGCCCG TCGTCTCAAC
TATCCGTTCT TCGATTCCGA TCATGAACTT GAGGCGCGCT GCGGCGTACG AATTCCGATA
ATTTTCGAGC ATGAGGGCGA AGCGGGGTTC CGCGATCGCG AGGCCCAGGT GATTGCCGAG
CTGACCGGGC GCAGTGGCAT CGTTCTGGCC ACAGGCGGCG GCGCGGTGCT CCGCGAGGTC
AACCGCGCGG CGTTGAAGGC CAATGGCACT GTGGTCTATC TGCGCGCCAG CCCGCACGAT
CTGTGGCTGC GCACGCGGCA TGACCGTAAC CGACCGCTCC TGCAGACGGA GGATCCGAAG
GGTCGCCTCG AGGCACTCTA TGCCGAGCGC GATCCGCTCT ATCGCGAGGT GGCGGACTTC
ATTATCGAAA CCGGCAAGCC GACCGTGGCG CAGCTTGCTA ATATGGTTCT TATGCAACTT
GAAATGGCCG GCTTTGTGTT TCCGCCCGCG GAAATCGTGC CCGAATCTGC CGAGGATGGT
GGGCCGCCGG CGCAGGACAC CCATTCATGA
|
|---|
| Protein sequence | MMHNGVCITP LAGSRPDAGA RRLIVQDLSP VTANRPNIFF VGLMGAGKTT VGRTVARRLN
YPFFDSDHEL EARCGVRIPI IFEHEGEAGF RDREAQVIAE LTGRSGIVLA TGGGAVLREV
NRAALKANGT VVYLRASPHD LWLRTRHDRN RPLLQTEDPK GRLEALYAER DPLYREVADF
IIETGKPTVA QLANMVLMQL EMAGFVFPPA EIVPESAEDG GPPAQDTHS
|
|---|
| |