Gene Rmet_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3263 
Symbol 
ID4040098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3533548 
End bp3538443 
Gene Length4896 bp 
Protein Length1631 aa 
Translation table11 
GC content64% 
IMG OID637978669 
Productglutamate synthase (NADH) large subunit 
Protein accessionYP_585404 
Protein GI94312194 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCGGCG CGTCACGCTC GTGTACGCCG CTGCGGTCCC GCTGTCTGAC ATCGTCGCTC 
GAAGAAGCAC GTACACAGCC ATCCCGTTCG GTCTGCCTTG CTGGCTGCGC AGCCTTCACC
GGAATTCAGC CCGTGGACCA CTCGCAACAA TCCTCCGAAC TCGCCGCCCG CCCGCAGGCT
CAGGGCCTGT ATGACCCGTC CAACGAGCAC GATGCCTGCG GCGTCGGCAT GGTGGCTCAC
ATCAAGGGCA AGAAATCCCA CGAAATCATC TCGCAGGGTC TGAAGATCCT CGAGAACCTG
GACCACCGGG GTGCCGTGGG CGCCGACGCG CTGATGGGCG ATGGCGCCGG TATCCTGATC
CAGATCCCGG ATCAGTTCTA CCGCGAGGAA ATGGCCAAGC AGGGCGTGAC CCTGCCGCCC
GCCGGCGAAT ATGGCGTGGG CATGATCTTT CTGCCTAAGG AACACGCATC GCGTCTGGCC
TGCGAACAGG AACTCGAACG CACCGTGCGC CTGGAAGGCC AGGTCGTGCT GGGTTGGCGT
GATGTGCCGG TGGACGCGAA CATGCCGATG TCCCCGACCG TGCGCAAGAC CGAGCCGGTG
ATCCGCCAGA TCTTCATCGG TCGTGGCCGC GACATCATGA CCACGGACGC GCTGGAACGT
AAGCTCTACG TCATCCGCAA GACCGCCAGC CACGCCATCC AGGCGCTCAA GCTCAAGCAC
GGCAAGGAAT ACTTCGTGCC GTCGATGTCG GCCCGTACCG TCGTGTACAA GGGCCTGCTG
CTGGCCAACC AGGTGGGCGA GTACTACCTG GACCTGCTGG ACGCCCGCGC CGTGTCGGCC
CTGGCTCTGG TCCACCAGCG CTTCTCGACC AATACGTTCC CGGCCTGGGA GCTGGCCCAC
CCGTACCGCA TGGTTGCCCA CAACGGCGAA ATCAACACGG TGAAGGGCAA CGTGAACTGG
GTGAACGCGC GTACCGGCGC GATCTCGTCG CCGGTGCTCG GCGATGACCT GCCCAAGCTC
TGGCCGCTGA TCTACCCGGG CCAATCGGAT ACGGCATCGT TCGACAACTG CCTCGAACTG
CTGACAATGG CCGGTTACCC GCTCGTCCAC GCGATGATGA TGATGATCCC GGAAGCTTGG
GAACAACACA CGCTGATGGA CGACAACCGT CGTGCCTTCT ACGAGTACCA CGCCGCGATG
ATGGAGCCGT GGGACGGCCC GGCCGCGATC TGCTTCACCG ACGGCCGCCA GATCGGCGCG
ACGCTGGACC GTAACGGTCT GCGTCCGGCC CGCTTCTACG TGACCGAAGA CGATTTCGTC
GTGCTGGCGT CGGAAGCCGG CGTGCTGCCG TTCCCCGAGT CGCGCATCGT CCAGAAGTGG
CGTCTGCAGC CGGGCAAGAT GTTCCTGATC GACATGGAGC AGGGTCGCAT CATCGACGAC
AAGGAACTCA AGGACAACCT GGCCAACGCC AAGCCGTACA AGAGCTGGAT CGACGCCGTG
CGCATCAAGC TCGACGAGCT CGAGGCCAAG GCCGAGGACG TAGCCGCCGA GAAGAAGCCG
GTGGCGCGTC TGCTCGACCG CCAGCAGGCA TTCGGCTACA CGCAGGAAGA CGTCAAGTTC
CTGATGGCCC CGATGGCCCT GGCCGGTGAG GAAGCCACGG GCTCGATGGG CAATGACTCG
CCGCTGGCTG TGCTGTCGTC GAAGAACAAG ACGCTCTACA ACTACTTCAA GCAGCTTTTC
GCGCAGGTGA CCAACCCGCC GATCGACCCG ATCCGCGAGA ACATGGTGAT GTCGCTGGTG
TCGTTCATCG GTCCGAAGCC GAATCTGCTG GAGCTGAACA ACATCAACCC GCCGATGCGC
CTCGAAGTGT CCCAGCCCGT GCTGGACTTC AAGGACATCG CCAAGATCCG CAACATCGAG
CACTACACCG GCGGCAAGTT CCGTTCGTAC GAACTGAACA TCTGCTACCC GGTGGCGTGG
GGCAAGGAAG GCATCGAGGC CCGCCTGGCG TCGCTGTGCG CGGAAGCCGT GGATGCGGTG
CGTTCGGGCT ACAACATCCT GATCGTGACG GACCGTCGCG TGGACGATGG CCAGGTGGCC
ATTCCCGCGC TGCTGGCCAC GTCGGCCATT CACCACCACC TGGTCGAGAA GGGCCTGCGC
ACGTCGGCCG GCCTGGTCGT GGAAACCGGT TCGGCCCGCG AAGTGCACCA TTTCGCGCTG
CTGGCCGGCT ATGGCGCTGA AGCCGTGCAC CCGTACCTGG CGATGGAAAC GCTGGCCGAC
ATGGCCTCGG GCCTGTCGGG TGACCTGTCG CCGGAAAAGG CTGTCAAGAA CTTCGTCAAG
GCGATCGGCA AGGGCCTGCA CAAGGTGATG TCGAAGATGG GCATCTCCAC GTACATGTCG
TACACGGGCG CCCAGATCTT CGAAGCCATC GGCCTGTCGC GCGAACTGGT GCAGAAGTAC
TTCCACGGTA CGCCGTCGAA CGTCGAAGGC ATCGGCATCT TCGAGGTGGC CGAGGAAGCG
CTGCGCCTGC ATCGCGACGC GTTTGGCAGC AACCCCGTGC TGGAAAACAT GCTCGAAGCC
GGCGGCGAAT ACGCATTCCG TATCCGCGGT GAAGAACACA TGTGGACCCC GGACTCGATC
GCCAAGCTGC AGCACTCGGT GCGCGCCGAC GATGGCAAGG GCCAGTACCA GACGTACAAG
GAATACGCGA ACATCATCAA CGACCAGAGC CGCCGTCACA TGACGCTGCG TGGCCTGTTC
GAGTTCAAGG TCGATCCGGC CCGCGCCATT CCGCTGGAAG AAGTGGAGTC GGCCAAGGAC
ATCGTCAAGC GTTTCGCCAG CGGTGCCATG TCGCTGGGTT CGATCTCGAC TGAAGCCCAC
ACGACGCTGG CCGTGGCGAT GAACCGCATC GGCGGCAAGT CGAACACCGG CGAAGGCGGC
GAGGACGAGA AGCGCTATCG CAACGAACTG CGCGGCATCC CCATCAAGCA GGGCGACACG
CTCAAGGGCC TGCTGGGCGA TGGCGTGATC GAGCGCGACC TGGAATTGAA GGCGGGCGAT
TCGCTGCGCT CGAAGATCAA GCAGGTGGCC TCGGGCCGTT TCGGCGTGAC TGCCGAATAC
CTGGCATCGG CCGATCAGAT CCAGATCAAG ATGGCCCAGG GCGCCAAGCC GGGCGAAGGC
GGCCAGCTGC CCGGCCACAA AGTCTCGGAC TACATCGGCA AGCTGCGTTA CTCGGTGCCG
GGTGTGGGTC TGATCTCGCC GCCGCCGCAC CACGACATCT ACTCGATCGA GGATCTGGCA
CAGCTGATCC ACGACCTGAA GAATGTGAAC CCGGTGTCGG ACATCTCGGT CAAGCTCGTG
TCCGAAGTGG GCGTGGGTAC CGTGGCGGCT GGCGTGGCCA AGGCCAAGGC CGATCACGTG
GTGATCGCCG GCCATGACGG CGGCACCGGC GCATCGCCGC TGTCGTCGAT CAAGCACGCC
GGCACGCCGT GGGAACTGGG TCTGGCCGAG ACGCAGCAGA CGCTGATGCT GAACGGCCTG
CGCAACCGTA TCCGCGTGCA AGCCGACGGT CAGATGAAGA CCGGCCGCGA CGTCGTGATC
GGCGCGCTGC TGGGCGCTGA CGAGTTCGGT TTTGCTACCG CGCCGCTGGT TGCCGAAGGC
TGCATCATGA TGCGCAAGTG CCATCTGAAC ACCTGCCCGG TGGGCGTGGC CACGCAAGAT
CCGGCGCTGC GCAAGAAATT CCAGGGCAAG CCCGAGCACG TTGTGAACTT CTTCTTCTTC
GTTGCGGAAG AAGCGCGCGA GATCATGGCG CAACTGGGTA TCCGCACGTT CGACGAACTG
ATCGGCCGCG CCGACCTGCT CGACATGCGC GCCGGTATCG AACACTGGAA GGCGCGTGGC
CTGGACTTCG GCCGCATCTT CTACCAGCCG CCGTTCCCGG CCGACGTGCC GCGCTACCAC
ACCGACGTGC AGGATCACGG CCTGTCGGCG GAAGCCGGCA AGGCGCTCGA CCACGTGCTG
ATCGCCAAGG CGCGTCCGGC CATCGACAAG GGCGAACGCG TGTCGTTCAT CCAGCCGGTG
AAGAACGTGA ACCGTACCGT TGGCGCGATG CTGTCCGGCG TGATCGCCAA GCAGCACGGC
CACGAAGGCC TGGCCGACGA CACGATCCAC ATCCAGTTCC AGGGCACCGC CGGCCAGTCG
TTTGCCGCGT TCCTGGCACA TGGCATCACG ATGGATCTGG TGGGTGACGC TAATGACTAC
GTGGGCAAGG GCCTGTCGGG CGGCCGCGTG ATCGTGCGCG CTCCGCACGA GTTCCGTGGC
GATCCGACCC GCAACATCAT CGTCGGCAAC ACGGTGCTGT ACGGCGCCAT CGCTGGTGAA
GCCTTCTTCA ACGGCGTGGG CGGCGAGCGC TTCGCGGTGC GTAACTCGGG TGCCACGGCT
GTCGTGGAAG GCACGGGCGA CCACGGTTGC GAATACATGA CCGGCGGTAC CGTCGTGGTG
CTGGGTGGTA CGGGACGTAA CTTCGCAGCC GGCATGTCCG GTGGCGTGGC CTACGTCTAC
GACGAGGATG GCCTGTTCGA CAAGCGCTGC AACACGTCGA TGGTGGCGCT CGAGGCAGTG
CTGGCTTCGG CCGACCAGGA GAAGGGCCAG CCCAAGGCGC AGTGGCACAA GTTCGGTGGC
GAGCGGACGG CCGACGAAGT CATCCTGCGT AACCTGATCG AGCAGCACTT CCGCTACACC
GGTTCGGAGC GCGCCAAGGC GCTGCTGGCG GACTGGACCA CGGCACGCCG CAAGTTCGTC
AAGGTCTTCC CGACCGAGTA CAAGCGCGCG CTGGGCGAGA TGTACGCGAA GGAACAGGCC
GCGCGCGACA ACGATCGCGA GGCAGTGGCC GCCTGA
 
Protein sequence
MCGASRSCTP LRSRCLTSSL EEARTQPSRS VCLAGCAAFT GIQPVDHSQQ SSELAARPQA 
QGLYDPSNEH DACGVGMVAH IKGKKSHEII SQGLKILENL DHRGAVGADA LMGDGAGILI
QIPDQFYREE MAKQGVTLPP AGEYGVGMIF LPKEHASRLA CEQELERTVR LEGQVVLGWR
DVPVDANMPM SPTVRKTEPV IRQIFIGRGR DIMTTDALER KLYVIRKTAS HAIQALKLKH
GKEYFVPSMS ARTVVYKGLL LANQVGEYYL DLLDARAVSA LALVHQRFST NTFPAWELAH
PYRMVAHNGE INTVKGNVNW VNARTGAISS PVLGDDLPKL WPLIYPGQSD TASFDNCLEL
LTMAGYPLVH AMMMMIPEAW EQHTLMDDNR RAFYEYHAAM MEPWDGPAAI CFTDGRQIGA
TLDRNGLRPA RFYVTEDDFV VLASEAGVLP FPESRIVQKW RLQPGKMFLI DMEQGRIIDD
KELKDNLANA KPYKSWIDAV RIKLDELEAK AEDVAAEKKP VARLLDRQQA FGYTQEDVKF
LMAPMALAGE EATGSMGNDS PLAVLSSKNK TLYNYFKQLF AQVTNPPIDP IRENMVMSLV
SFIGPKPNLL ELNNINPPMR LEVSQPVLDF KDIAKIRNIE HYTGGKFRSY ELNICYPVAW
GKEGIEARLA SLCAEAVDAV RSGYNILIVT DRRVDDGQVA IPALLATSAI HHHLVEKGLR
TSAGLVVETG SAREVHHFAL LAGYGAEAVH PYLAMETLAD MASGLSGDLS PEKAVKNFVK
AIGKGLHKVM SKMGISTYMS YTGAQIFEAI GLSRELVQKY FHGTPSNVEG IGIFEVAEEA
LRLHRDAFGS NPVLENMLEA GGEYAFRIRG EEHMWTPDSI AKLQHSVRAD DGKGQYQTYK
EYANIINDQS RRHMTLRGLF EFKVDPARAI PLEEVESAKD IVKRFASGAM SLGSISTEAH
TTLAVAMNRI GGKSNTGEGG EDEKRYRNEL RGIPIKQGDT LKGLLGDGVI ERDLELKAGD
SLRSKIKQVA SGRFGVTAEY LASADQIQIK MAQGAKPGEG GQLPGHKVSD YIGKLRYSVP
GVGLISPPPH HDIYSIEDLA QLIHDLKNVN PVSDISVKLV SEVGVGTVAA GVAKAKADHV
VIAGHDGGTG ASPLSSIKHA GTPWELGLAE TQQTLMLNGL RNRIRVQADG QMKTGRDVVI
GALLGADEFG FATAPLVAEG CIMMRKCHLN TCPVGVATQD PALRKKFQGK PEHVVNFFFF
VAEEAREIMA QLGIRTFDEL IGRADLLDMR AGIEHWKARG LDFGRIFYQP PFPADVPRYH
TDVQDHGLSA EAGKALDHVL IAKARPAIDK GERVSFIQPV KNVNRTVGAM LSGVIAKQHG
HEGLADDTIH IQFQGTAGQS FAAFLAHGIT MDLVGDANDY VGKGLSGGRV IVRAPHEFRG
DPTRNIIVGN TVLYGAIAGE AFFNGVGGER FAVRNSGATA VVEGTGDHGC EYMTGGTVVV
LGGTGRNFAA GMSGGVAYVY DEDGLFDKRC NTSMVALEAV LASADQEKGQ PKAQWHKFGG
ERTADEVILR NLIEQHFRYT GSERAKALLA DWTTARRKFV KVFPTEYKRA LGEMYAKEQA
ARDNDREAVA A