Gene Rmet_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3258 
Symbol 
ID4040093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3528320 
End bp3529096 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID637978664 
Producthypothetical protein 
Protein accessionYP_585399 
Protein GI94312189 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGCT TCTTTACCTC GATTGGCTCG ACGGTACGCC AGTTCGTCGG CGGCCTGGGT 
CATGCCACGC GCATGTTCCT GACGATGCTG GCGCTCTCGC CCGCGCTGTT GCGCCGCTTC
CGGCTGGTGA CCGACCAGGT GTTCTTCGTC GGCAACCTTT CGCTCGTGAT CATCGCGGTG
TCGGGTTTGT TCGTCGGATT CGTGCTGGGT CTGCAGGGCT ACTACACGCT GAACCGCTTC
GGTTCGGAGC AGGCGCTGGG CCTTCTGGTA GCCCTGTCGC TGGTGCGCGA GCTGGGGCCG
GTGGTGGCAG CGCTGCTGTT CGCCGGCCGC GCTGGCACGT CGCTGACGGC CGAAATCGGT
CTGATGAAGG CCGGTGAGCA ACTCAGCGCC ATGGAGATGA TGGCCGTGAA CCCGTTGCAG
CGCGTGATCG CACCGCGTTT CTGGGCCGGC GTGATCGCCA TGCCTGTGCT GGCCACGATC
TTCAGCGCCC TGGGTGTCCT GGGTGGCTAC CTGGTCGGCG TGCAACTGAT TGGTGTGGAC
GCCGGCGCAT TCTGGTCGCA GATGCAGAAC GGCGTCGATG TGCGCGCGGA TGTGCTCAAC
GGCGTGATCA AGAGCTTTAT TTTCGGTATC ACCGTGACGT TCATCGCGCT GTATCAAGGT
TTCGAAGCCA AGCCGACCCC GGAGGGCGTA TCGCGCGCCA CCACACGTAC CGTGGTACTG
GCCTCGCTGG CCGTGCTGGG ACTGGATTTC CTGCTGACCG CGCTGATGTT CAGCTAG
 
Protein sequence
MNGFFTSIGS TVRQFVGGLG HATRMFLTML ALSPALLRRF RLVTDQVFFV GNLSLVIIAV 
SGLFVGFVLG LQGYYTLNRF GSEQALGLLV ALSLVRELGP VVAALLFAGR AGTSLTAEIG
LMKAGEQLSA MEMMAVNPLQ RVIAPRFWAG VIAMPVLATI FSALGVLGGY LVGVQLIGVD
AGAFWSQMQN GVDVRADVLN GVIKSFIFGI TVTFIALYQG FEAKPTPEGV SRATTRTVVL
ASLAVLGLDF LLTALMFS