| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3233 |
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| Symbol | |
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| ID | 4040068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3508636 |
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| End bp | 3509832 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637978639 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_585374 |
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| Protein GI | 94312164 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCC GCTTCTGGCT GTTCTTCGCT CAGGCTGTCA CGGTTGTTCT GGCCGTGTGG
TTCGTCGTGG CCACACTCAA ACCCGAGTGG CTGCAGCGCG GGCGGGTGGC CGTGCAATCG
GGTTCGCCCA TTGTGGCGCT AAAAGAGGTC GTCCCCAGTG TGGAAGGTTC GGCCGCTCCG
GGGTCCTATA GCGAGGCGGC CCGCCTTGCC ATGCCCGCAG TCGTCAATAT TTTCACCAGC
AAGAACGGAT CGAAGCGATC GCCCAATAAT CCGCAGGCCG AAGATCCGTG GTTCCGGTTC
TTCTTTGGCG ACCGCTTGCC GGAGCGCCAA GAGCCGGTGT CGAGCTTGGG CTCGGGCGTG
ATCGTCAGTG CCGAAGGTTA CATTCTAACC AACCACCACG TTGTGGATGG CGCCGACGAA
ATCGAGGTGG CGCTGACCGA CGGACGCAAG GCAAATGCCA AGGTGGTGGG CTCCGATCCC
GAAACCGACC TTGCCGTGCT GAAGGTCACG CTCAAGGACT TGCCTGCGAT CACGCTGGGG
CGGATCGAGA ACGTGAAGGT GGGCGATGTG GTGCTGGCTA TCGGCAACCC GTTTGGTGTC
GGCCAGACCG TGACAATGGG TATTGTCTCG GCGCTCGGCC GCAGCCATCT CGGCATCAAC
ACATTCGAGA ACTTCATTCA GACCGATGCA GCGATCAACC CCGGTAACTC TGGTGGTGCA
CTGGTCGACG CACAGGGCAA TCTGCTTGGC ATCAACACGG CGATCTATTC GCGCTCCGGC
GGCTCGCTCG GTATTGGCTT TGCGATTCCT GTGTCGACCG CCAAGCAAGT CATGGAATCG
ATCATCTCCA CGGGTAGCGT GACACGTGGC TGGATCGGCG TGGAGCCGCA GGATCTGACC
CCAGAGATTG CCGAGTCTTT CGGGCTCGAA GCCAAGGAAG GCGCGCTGAT TGCAGCGGTG
GTCCAGGGTG GGCCAGCTGA CAAGGCCGGC GTCAAACCTG GGGATGTGCT GGTCTCGGTC
GACAATCAAT CGATCTCGGA CACCACCGCC CTGCTCAACG CGATTGCACA GTTGAAACCG
GGCGCCGAGG TGAAGATGAA GGTGATTCGA CGCGGCAAAC CGGCGGAACT CACTGTCACG
ATCGGCAAGC GCCCGCCTCC TCCGCGCAGG CCGATGCCGC TGGATGAGGA AGAGTAG
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| Protein sequence | MLRRFWLFFA QAVTVVLAVW FVVATLKPEW LQRGRVAVQS GSPIVALKEV VPSVEGSAAP
GSYSEAARLA MPAVVNIFTS KNGSKRSPNN PQAEDPWFRF FFGDRLPERQ EPVSSLGSGV
IVSAEGYILT NHHVVDGADE IEVALTDGRK ANAKVVGSDP ETDLAVLKVT LKDLPAITLG
RIENVKVGDV VLAIGNPFGV GQTVTMGIVS ALGRSHLGIN TFENFIQTDA AINPGNSGGA
LVDAQGNLLG INTAIYSRSG GSLGIGFAIP VSTAKQVMES IISTGSVTRG WIGVEPQDLT
PEIAESFGLE AKEGALIAAV VQGGPADKAG VKPGDVLVSV DNQSISDTTA LLNAIAQLKP
GAEVKMKVIR RGKPAELTVT IGKRPPPPRR PMPLDEEE
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