| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3230 |
|---|
| Symbol | |
|---|
| ID | 4040065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3506582 |
|---|
| End bp | 3507199 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637978636 |
|---|
| Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_585371 |
|---|
| Protein GI | 94312161 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC AGCAAGACGT GAAGAGCGTG GACAAAGGTC GCCGCAATTG GTTGATCGCG
ACTTCTGTCG CAGGCGGCGT AGGAGGCGTA GCAGTAGCAG TACCGTTCGT GAGTACCTTT
GCACCTTCCG AGAAGGCGAA GGCTGCGGGC GCACCGGTCG AGGCGGACAT TGGCGCCCTG
AAGCCCGGTG AGATGATGAC GGTGGAGTGG CGTGGCAAGC CAGTCTGGAT TCTGCGGCGC
ACGCCGGAGA TGATGGCTTC CCTGAAGAAG ACCGACGCCG AAGTCGCAGA CCCTAATTCC
GACGTCCCCT TCACGATGCC GACGCCGGAG TACTGCAAGA ACGAAAGCCG TTCCCGTGCC
GACCACAAGG ACCTGCTGGT CGTGGTTGGA ATCTGTTCCC ACCTCGGCTG CTCGCCATCC
GGCCCATTTC CCGCAGGCGC CAACCCTCAG CTCGGCGCTG ATCCCGGCTT CCTCTGCCCG
TGCCATGGCT CGACCTTCGA CCTGGCTGGC CGCGTGTTCA AGAACAAACC GGCCCCGCAG
AACCTTGACG TACCCCCGTA CCAGTTCCTG ACCGACACCA AGCTCGTGAT CGGCAAGGAC
GAGAAAGGAG AAGCCTGA
|
|---|
| Protein sequence | MSDQQDVKSV DKGRRNWLIA TSVAGGVGGV AVAVPFVSTF APSEKAKAAG APVEADIGAL
KPGEMMTVEW RGKPVWILRR TPEMMASLKK TDAEVADPNS DVPFTMPTPE YCKNESRSRA
DHKDLLVVVG ICSHLGCSPS GPFPAGANPQ LGADPGFLCP CHGSTFDLAG RVFKNKPAPQ
NLDVPPYQFL TDTKLVIGKD EKGEA
|
|---|
| |