Gene Rmet_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3228 
Symbol 
ID4040063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3504395 
End bp3505138 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID637978634 
Productcytochrome c1 
Protein accessionYP_585369 
Protein GI94312159 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TGCTTTCGAT CTTCGCACTG GTCGGCGCTT GTTTCGCGGC AATGCCCGCG 
ATGGCTTCAG AAGGGGGCTT CCCGCTGGAG CCGGCGCCGC TGGACACGAG CGATGTGTCA
TCGCTGCAGC GCGGTGCCAA GCTGTTCGTC AACTACTGCC TGAATTGCCA CGGCGCGTCG
ATGATGCGCT ACAACCGGCT CAAGGGCCTG GACCTTACCG ACGAACAGAT CCAGCAGAAC
CTGCTGTTCT CGGCGGGCAA GGTGGGCGAA ACGATGACAA TCGCGATGCA CCCGAAGGAC
GCCAAGGCAT TCTTCGGCGC GATTCCCCCG GACCTGTCGG TCATCGCCCG CGCTCGCGGC
AACGACTGGC TCTACACGTA CCTGCGCACG TTCTACCGTG ATGACACCCG CGCCACGGGC
TGGAACAACC TGGTCTTCCC GAGCGTCGGC ATGCCGCACG TGCTGTGGGA ACTGCAGGGC
CAGCGCGCCG CCAAGTTCGC GGAAGCCGAG GAACACGGCG AGAAGGTGCA CAAGTTCACA
GGTTTCGAGC AGATCACCCC GGGCAAGCTG AGCTCGCAGG AATATGACCA GGCCGCAGCC
GATCTGGTGA ACTACCTGAA CTGGATGGCC GAGCCGGAAC AAAGCCATCG CAAGCGTCTG
GGCGTGTGGG TGCTCCTGTT CCTGGGCATG TTCACCGTGT TTGCCTGGCG CCTGAATGCC
GCTTACTGGA AAGATGTGAG GTAA
 
Protein sequence
MKKLLSIFAL VGACFAAMPA MASEGGFPLE PAPLDTSDVS SLQRGAKLFV NYCLNCHGAS 
MMRYNRLKGL DLTDEQIQQN LLFSAGKVGE TMTIAMHPKD AKAFFGAIPP DLSVIARARG
NDWLYTYLRT FYRDDTRATG WNNLVFPSVG MPHVLWELQG QRAAKFAEAE EHGEKVHKFT
GFEQITPGKL SSQEYDQAAA DLVNYLNWMA EPEQSHRKRL GVWVLLFLGM FTVFAWRLNA
AYWKDVR