Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3208 |
Symbol | |
ID | 4040042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3481532 |
End bp | 3482725 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978613 |
Product | saccharopine dehydrogenase |
Protein accession | YP_585349 |
Protein GI | 94312139 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCT CAACGCTTGG TCCCGCCGCC GTGCGCGACC TGACCCTGGC TCCACGGCCG CTATCCGTGG TGGTGCTCGG CGCTGGCAAG ATCGGCCGTG TGATTGCCGC GATGCTGGCC GCCTCGGGCG ACTACCGCGT CTGCCTGGTC GATCACGACG CGCACCGGCT CGACGGCATG CCGCGCCAGA TCGCCGTGCG CGCGGGCGAT CCAACCGAAC CCGGCACCTG CGCGGCGCTG CTGGCCGGCG CTGATGCGGT GCTCAATGCG CTGCCGTTCC ATGCCGCCGT CAACGTGGCA AAAGTGGCAG CGCGGCTTGG CGTGCACTAC TTCGATCTGA CCGAGGACGT GGCCGCCACC CGGGTGATTC GCGAACTGGG GCGGAGTGCG CGTGCCGTGC TGATGCCCCA GTGTGGGCTC GCGCCGGGTT TCATCGGCGT GGTCGGCCAC GACCTCGCGC AGCGCTTCCT GCGCGGCGGC GGCGAACTTC TCGATTTGCG GATGCGCGTG GGCGCGCTGC CGCGCTATCC GAGCAACGCA CTCAAGTACA ACCTGACGTG GAGTACCGAG GGGCTGATCA ACGAGTACTG CAACCCGTGC GAAGCCATCG TCGACGGTCG GCGCGTGGAA CTGCCCGCGC TGGAAGGGCA TGAGACCTTC GCACTGGACG GCGTCGAATA CGAGGCCTTT AATACATCTG GAGGGCTGGG CACTTTGCCA GACACCCTGG CAGGCCATGC GCGGCAAGTC GACTACAAGT CGATCCGCTA CCCCGGGCAC TGCGCGCAGA TGAAACTGCT GCTGAATGAC CTGCGGCTGC GCGAACGGCG CGAGTGGCTG CGCGAGATCT TCGAGCACGC GATTCCGGTT ACCGAGCAGG ACGTGGTGAT CGTCTTTGCC AGCGCCACCG GGCATCCGCC CGGCGTGAGG GGCGAAGGCA AGCGTGGACC GCTCACGCAG GCATCGTTCT CCGCGCGCAT CGGCGGCATG GCGGACTTTG CCGGGATTGG CCACGTCAAC GCGATCCAGC TGACCACGGC GGCGGGCATC TGCACGGCGC TCGACCTTGT GGCCACGGGC GTGCTGCCGC AGGCCGGGTT CGTGCCGCAG GAAGCCATGC CGCTCGACCG GTTCCTGGCC AACCGCTTCG GCCAGCACTA CTCGCATCAT CCGCTACAGG AGACGCTCGC ATGA
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Protein sequence | MQPSTLGPAA VRDLTLAPRP LSVVVLGAGK IGRVIAAMLA ASGDYRVCLV DHDAHRLDGM PRQIAVRAGD PTEPGTCAAL LAGADAVLNA LPFHAAVNVA KVAARLGVHY FDLTEDVAAT RVIRELGRSA RAVLMPQCGL APGFIGVVGH DLAQRFLRGG GELLDLRMRV GALPRYPSNA LKYNLTWSTE GLINEYCNPC EAIVDGRRVE LPALEGHETF ALDGVEYEAF NTSGGLGTLP DTLAGHARQV DYKSIRYPGH CAQMKLLLND LRLRERREWL REIFEHAIPV TEQDVVIVFA SATGHPPGVR GEGKRGPLTQ ASFSARIGGM ADFAGIGHVN AIQLTTAAGI CTALDLVATG VLPQAGFVPQ EAMPLDRFLA NRFGQHYSHH PLQETLA
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