Gene Rmet_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3198 
Symbol 
ID4040032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3473199 
End bp3474053 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID637978603 
Product5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_585339 
Protein GI94312129 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCG CGCGGACCTT TCGCCCCCGT CGGCACACCG GTATGCTGGC GCTCTCTTCG 
TTTCCCGCGT TTTCCGCCCT GCCTGCCATG ACCCTCGGCA TTCTTGCCGC CCTGCACGAT
GAAGTCGACG GGCTGATCGC CGCCATGCGC CATGAGGACG CGCGCGCCAC GAAGCGCACG
ATCGGGATGC GCGATTACTA CAGCGGCACG CTGCACGGCC AGCCGGTGGT GCTGGTGCTG
GCACGGATCG GCAAGGTGGC CGCGGCGGCC ACGACGGTCA CGCTGATCCG CGAGTTCGGT
GTGAACGAGA TCGTCTTCTC CGGCTTGGCC GGCGGTGTCG GCCCGGAGGT TCGGGTGGGC
GATATCGTGG TGGCCGACCG CACCGTCCAG CATGATCTGG ACGCCCGGCC ACTGTTCCCG
CGCCACGAAG TGCCGTTGCT CGCCCGGACC GAATTCCCGG CCGATCCCGG CCTCACCGGC
GCTTTGCGCC AGGCCGCCGA GGACTTCCTT CGGCAAGATC TGGCCACTGA AGTCCCGGAT
GGCGTGCTGG CTCGCTTCGG GGTGCGCGAT CCGCGCCTGC ACGTGGGGAT GATCGCCAGC
GGCGACCAGT TCATCGGCTC GCCGGCGGCG GTCAGCGGAT TGCGCGAGCA ATTGCCGGCG
CTGCAGGCCG TGGAAATGGA AGGCGCCGCC CTGGCGCAGA TTTGCTACGA ATATGGCGTG
CCCTACGCGC TACTGCGAAC GATCTCGGAC CGGGCCGACG ACACCGCGCA TGTGGATTTT
TCGTCATTTC TACGTGACGT CGCCAGTCAC TACTCCGGGG CGATCCTGCG TCGATTCCTT
GATGCAAAGG CTTGA
 
Protein sequence
MHGARTFRPR RHTGMLALSS FPAFSALPAM TLGILAALHD EVDGLIAAMR HEDARATKRT 
IGMRDYYSGT LHGQPVVLVL ARIGKVAAAA TTVTLIREFG VNEIVFSGLA GGVGPEVRVG
DIVVADRTVQ HDLDARPLFP RHEVPLLART EFPADPGLTG ALRQAAEDFL RQDLATEVPD
GVLARFGVRD PRLHVGMIAS GDQFIGSPAA VSGLREQLPA LQAVEMEGAA LAQICYEYGV
PYALLRTISD RADDTAHVDF SSFLRDVASH YSGAILRRFL DAKA