| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3188 |
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| Symbol | |
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| ID | 4040022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3462310 |
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| End bp | 3464124 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978593 |
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| Product | peptidase M61 |
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| Protein accession | YP_585329 |
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| Protein GI | 94312119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGA TCCGCTACGC CATCGCCCCG CTTCATCCGG AAGCCCACCT GTTCGCCGTC
ACCGTGACGG TGGATGTTCC CGATCCCGCT GGCCAGGTTT TCACGCTCCC TGCGTGGATT
CCGGGCAGCT ACATGATTCG CGACTTCGCC CGCAATATCG TCCGCATCCG GGCCGATGCG
GGCGACGTGG CGGTGCCGCT GACCAAGCTC GACAAGCAGA GCTGGCAGGC CGCGGCGCTG
GCGGCGGATG CCGGGCCGCT AGTGGTCAGC TACGAGGTGT ACGCGTGGGA TTTGTCGGTG
CGCGCCGCGC ATCTCGATAC CACGCACGGC TTCTTCAATG GCAGTTCGGT GTTCCTGCGT
GTGGTCGGGC AGGACGATGG TCCGTGCTCG GTCGATATCC ACGCGCCCGC GGGCGAAGCC
TATGCCGACT GGCGCGTTGC TACAGCATTG CCCGAGGCAC GCGGCCCCGG TGGCGCGCGG
CGTTACGGCT TCGGACGCTA CCAGGCCGCC GACTACGATG AACTGATCGA CCATCCGGTG
GAGATGGGCA CGTTCGCGCT GGCCAGCTTC CGCGCCTGCG GCGTGCAGCA TGACGTGGTC
TTCACGGGCA AGGTGCCGCA GCTTGACCTG CAGCGCGTCT GCCGCGACCT GAAGAAGATC
TGCGAGGCGC AGATCAAGCT GTTCGAGCCG CGCTCGGCCC GTGCGCCGAT GCTCGACAGC
AACCGCCGCT ACGTGTTCAT GACGATGGTC ACGACCGACG GCTATGGCGG CCTGGAGCAT
CGCGCCAGCA CGGCACTGAT GTGCGCGCGT AACGATCTGC CCGCACGCGG CGACAGCGAG
GCCAGCGAGG GGTATCGCAC CTTCCTTGGC CTGTGCAGCC ACGAGTATTT CCACACCTGG
AACGTCAAGC GGATCAAGCC GGCGGCATTC GTGCCCTATC AGCTCGAGAG TGAGACCTAC
ACGCCGCTGC TCTGGTTGTT CGAAGGCTTC ACGAGCTACT ACGACGATCT GGTTCTGGTT
CGCACCGGGC TGGTGACCGA CCAGCAATAC GTCGAGATGC TGGGCAAGAC CTGGAACGGC
GTGCTGCGCG GCAGCGGCCG CACCAAGCAG AGCGTGGCGG ACAGCTCGTT CGATGCCTGG
ACCAAGTACT ACCGCCAGGA CGAGAACGCG CCGAACGCCA TCGTCAGCTA CTACACCAAG
GGTTCGCTGG TGGCGCTGGC GCTGGACCTG ACGATCCGCG AGAAGACGCG CGGCCGCAAG
TCGCTCGATG ACATCATGCG CGCGCTATGG CAACGCTACG GGCGCGACTT CTACGCGCCG
GGCGCCGCGC AGCGCGGCGT GACCGAGGCG GAGGTCTACG CGCTGTTCGA TGATGTCACC
GGCCTGAAGC TCGGTGCCCT GTTGCGCGCG CTGACCGAGG GCACGGGCGA GATCGGACTG
GTGCCGTTGT TCCGTGCGTT CGGGGTCAAG GCGGAAGTCC AGAAGCCGGA CGGCACGGCC
GCGCTCGGCA TCAAGACGGC CAAGCAGGAC GGCTGGGTGC GCGTGAGCCA GGTGCTCGAC
GGTGGGGCGG GGCAGAAGGC CGGGCTGTCG GCGGGCGACC TGCTGGCCGC CGTCGACGGG
CTGCGCGTGG CGCCGGGTCA GCTTGAAAAG CTGCTCGGGC GTTACCGGGC GGGCGATCGC
GTGGAACTCC ACGTGTTCCG GCGCGATGAA CTGCAGGTAT TGCCGGTGAC GCTGGCGCGT
GAGCCGGCGG TGCAGTACAA AGTGTCGGTG GAAACGGGCA AGCATGTCGG GAGAGCGCGC
TGGCTTGGCC AGTAA
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| Protein sequence | MTPIRYAIAP LHPEAHLFAV TVTVDVPDPA GQVFTLPAWI PGSYMIRDFA RNIVRIRADA
GDVAVPLTKL DKQSWQAAAL AADAGPLVVS YEVYAWDLSV RAAHLDTTHG FFNGSSVFLR
VVGQDDGPCS VDIHAPAGEA YADWRVATAL PEARGPGGAR RYGFGRYQAA DYDELIDHPV
EMGTFALASF RACGVQHDVV FTGKVPQLDL QRVCRDLKKI CEAQIKLFEP RSARAPMLDS
NRRYVFMTMV TTDGYGGLEH RASTALMCAR NDLPARGDSE ASEGYRTFLG LCSHEYFHTW
NVKRIKPAAF VPYQLESETY TPLLWLFEGF TSYYDDLVLV RTGLVTDQQY VEMLGKTWNG
VLRGSGRTKQ SVADSSFDAW TKYYRQDENA PNAIVSYYTK GSLVALALDL TIREKTRGRK
SLDDIMRALW QRYGRDFYAP GAAQRGVTEA EVYALFDDVT GLKLGALLRA LTEGTGEIGL
VPLFRAFGVK AEVQKPDGTA ALGIKTAKQD GWVRVSQVLD GGAGQKAGLS AGDLLAAVDG
LRVAPGQLEK LLGRYRAGDR VELHVFRRDE LQVLPVTLAR EPAVQYKVSV ETGKHVGRAR
WLGQ
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