| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3183 |
|---|
| Symbol | |
|---|
| ID | 4040017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3455220 |
|---|
| End bp | 3455990 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637978588 |
|---|
| Product | uracil-DNA glycosylase |
|---|
| Protein accession | YP_585324 |
|---|
| Protein GI | 94312114 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0692] Uracil DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.315974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG ACCTGTTTGC GCCCGACACG CCGGAAACTT CCAGCGCCGC ACCCCAGACC
GTCAGCCTGC AGGAGCAGGC CAATGCCCTG CCCGCCGCTT GGCGAACCTT GCTCGCGCCA
TGCCTGGGCA AGGCCGAATG GTCGTCGCTG TGCGCGTTCG TCGACGAAGA ACGCGCGGCG
GGCAAGCCGG TGTTTCCACA CGCGGTATTC CATGCCCTGC ACCTGACGCC GCCAGACGCG
GTCAAGGTCG TGATCCTTGG TCAGGACCCG TACCACGGCA CCGGCGTCGT GGATGGACTG
GAGATCCCGC AGGCACACGG GCTGGCCTTC TCCGTACCCG AGGGCGTCAA GGTGCCACCA
AGCCTGCGCA ACATCTTCAA GGAGATCGGC GCGGAATACG GCGTGGCGCC GACGCGTGCG
TCGGGCAATC TGGAAGGCTG GGCACGTCAG GGCGTGCTGC TGCTGAACAC GGTACTGACG
GTCGAGCAGG GACAGGCCGC CAGTCATGCG AAGCGCGGCT GGGAAGCTGT GACCGACTGC
GTGATCCACG CGCTGGCGGC ATCGCGGCCG AACCTGGTGT TCCTGCTCTG GGGCAGCCAC
GCGCAGGCCA AGCGCGCCTT GCTCGAAGGC CAGACGCATT GCGTGCTGGA AGCGCCGCAT
CCGTCGCCGC TGTCAGCGCA CCGGGGATTC CTGGGCTGCG GCCATTTCCG TCAGGCCAAC
GACTGGCTCG AGCGCCACGG CCGTGACGGT ATCGACTGGC AGGCGACCTG A
|
|---|
| Protein sequence | MQADLFAPDT PETSSAAPQT VSLQEQANAL PAAWRTLLAP CLGKAEWSSL CAFVDEERAA
GKPVFPHAVF HALHLTPPDA VKVVILGQDP YHGTGVVDGL EIPQAHGLAF SVPEGVKVPP
SLRNIFKEIG AEYGVAPTRA SGNLEGWARQ GVLLLNTVLT VEQGQAASHA KRGWEAVTDC
VIHALAASRP NLVFLLWGSH AQAKRALLEG QTHCVLEAPH PSPLSAHRGF LGCGHFRQAN
DWLERHGRDG IDWQAT
|
|---|
| |