Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3181 |
Symbol | trpC |
ID | 4040015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3453777 |
End bp | 3454589 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978586 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_585322 |
Protein GI | 94312112 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.509881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCA AGTCCGACAT CCTGGAAAAG ATCCTGGCCG TGAAGGCCGA TGAGGTGGCA GCCGCGCGCA AGAAGCGCGA CCTGCCGAGC CTGCGTGCCG AGGCCGAGAG CCTGCGTCAC GAAACCGGCA TGGCCCCGCG TGGCTTCGAG CGCGCACTGC GCGACAAGAT CGCGGCCGGC AACGCCGGCG TGATCGCCGA GGTCAAGAAA GCCTCGCCGT CGAAGGGCGT GCTGCGCGAG AACTTCGTGC CGGAGGCCAT CGCCGAAAGC TACGCCGCCC ATGGCGCGGC GTGCCTGTCC GTGCTGACCG ACGTGAATTT CTTCCAGGGT CATGCCGAGT ACCTGAAGCG CGCGCGTGGC GCCTGCCCGC TGCCGGCGCT GCGCAAGGAC TTCATGGTCG ATATGTACCA GGTCTACGAA GCCCGCACCT GGGGCGCCGA CTGCATCCTG CTGATCGTCT CCGCGCTCGA CCACGGCCTG ATGGCCGAGC TGGAAGCGTG CGCGCACGAA CTCGGCATGG ATGTGCTCGT GGAAGTCCAC GGCGGCGAGG AACTCGATAG TGCGCTGCGA CTGAAGACGC CGCTGCTGGG CGTGAACAAC CGCAACCTGC GCACCTTCGA GGTCTCGCTG GACAACACGC TGGACCTGCT GCCGCGCATG CCGGCCGACC GGCTCGTGGT AACCGAATCG GGCATCCTCG GGCCCGACGA CGTCAAGCGG ATGCGCGACG CCGACGTCCA CGCCTTCCTG GTCGGCGAAG CGTTCATGCG CGCGCCGGAG CCGGGCGTGG AACTGGCCCG CCTGTTCTCG TGA
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Protein sequence | MSAKSDILEK ILAVKADEVA AARKKRDLPS LRAEAESLRH ETGMAPRGFE RALRDKIAAG NAGVIAEVKK ASPSKGVLRE NFVPEAIAES YAAHGAACLS VLTDVNFFQG HAEYLKRARG ACPLPALRKD FMVDMYQVYE ARTWGADCIL LIVSALDHGL MAELEACAHE LGMDVLVEVH GGEELDSALR LKTPLLGVNN RNLRTFEVSL DNTLDLLPRM PADRLVVTES GILGPDDVKR MRDADVHAFL VGEAFMRAPE PGVELARLFS
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