Gene Rmet_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3181 
SymboltrpC 
ID4040015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3453777 
End bp3454589 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID637978586 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_585322 
Protein GI94312112 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.509881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCA AGTCCGACAT CCTGGAAAAG ATCCTGGCCG TGAAGGCCGA TGAGGTGGCA 
GCCGCGCGCA AGAAGCGCGA CCTGCCGAGC CTGCGTGCCG AGGCCGAGAG CCTGCGTCAC
GAAACCGGCA TGGCCCCGCG TGGCTTCGAG CGCGCACTGC GCGACAAGAT CGCGGCCGGC
AACGCCGGCG TGATCGCCGA GGTCAAGAAA GCCTCGCCGT CGAAGGGCGT GCTGCGCGAG
AACTTCGTGC CGGAGGCCAT CGCCGAAAGC TACGCCGCCC ATGGCGCGGC GTGCCTGTCC
GTGCTGACCG ACGTGAATTT CTTCCAGGGT CATGCCGAGT ACCTGAAGCG CGCGCGTGGC
GCCTGCCCGC TGCCGGCGCT GCGCAAGGAC TTCATGGTCG ATATGTACCA GGTCTACGAA
GCCCGCACCT GGGGCGCCGA CTGCATCCTG CTGATCGTCT CCGCGCTCGA CCACGGCCTG
ATGGCCGAGC TGGAAGCGTG CGCGCACGAA CTCGGCATGG ATGTGCTCGT GGAAGTCCAC
GGCGGCGAGG AACTCGATAG TGCGCTGCGA CTGAAGACGC CGCTGCTGGG CGTGAACAAC
CGCAACCTGC GCACCTTCGA GGTCTCGCTG GACAACACGC TGGACCTGCT GCCGCGCATG
CCGGCCGACC GGCTCGTGGT AACCGAATCG GGCATCCTCG GGCCCGACGA CGTCAAGCGG
ATGCGCGACG CCGACGTCCA CGCCTTCCTG GTCGGCGAAG CGTTCATGCG CGCGCCGGAG
CCGGGCGTGG AACTGGCCCG CCTGTTCTCG TGA
 
Protein sequence
MSAKSDILEK ILAVKADEVA AARKKRDLPS LRAEAESLRH ETGMAPRGFE RALRDKIAAG 
NAGVIAEVKK ASPSKGVLRE NFVPEAIAES YAAHGAACLS VLTDVNFFQG HAEYLKRARG
ACPLPALRKD FMVDMYQVYE ARTWGADCIL LIVSALDHGL MAELEACAHE LGMDVLVEVH
GGEELDSALR LKTPLLGVNN RNLRTFEVSL DNTLDLLPRM PADRLVVTES GILGPDDVKR
MRDADVHAFL VGEAFMRAPE PGVELARLFS