Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3172 |
Symbol | |
ID | 4040006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3444791 |
End bp | 3446440 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637978577 |
Product | cytochrome d1, heme region |
Protein accession | YP_585313 |
Protein GI | 94312103 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGA AATCATGGAT GTTCCCCGCA CTGGCGGCCA TGCCGCTCTT CTTCTGGAGT GCGCACGGTA GCGCCCAGAC GGCGCCGACT CAGAATCCCG AGCCGAAGCT GACTGCGGAA GAATTCAACC ACGCCAGGCA GATCTATTTC GAACGGTGCG CAGGCTGCCA TGGCGTGCTG CGCAAGGGCG CCACGGGCAA ACCGCTGACA CCCGACATCA CGCGTGCCCG TGGCACCGAA TACTTGAAGA CGTTCATCAA GTACGGCAGT CCGGCCGGTA TGCCCAACTG GGGCACCTCG GGCGATCTCA CCGATCCCGA GGTCGATCTG ATGGCGCGCT ACATCCAGCT CGATCCTCCG ACACCGCCGG AATTCTCGCT GGCCGACATC GAAAAATCGC GCAAGGACAT CGTGCCCGTG GCCAAGCGGC CAACGCGCAA GATGAACAAC TACAACCTGC AGAACCTGTT CTCGGTCACG CTGCGCGATT CCGGTGAGGT GGCCCTGATC GACGGCGACA GCAAGCAGAT CATCAATATC GTCAAGACCG GCTACGCGGT GCACATCTCG CGCATGTCGG CGTCCGGGCG CTACCTGTAC GTGATCGGCC GCGATGCGCG TCTGAACCTG ATCGACCTGT GGCTGCCCAA GCCGGACAAC GTCGCGGAAG TAAAGATCGG TCTCGAGGCG CGTTCGGTGG AAACCTCGAA GTACAAGGGC TACGAAGACA AGTACGCCGT GGCCGGCTCG TACTGGCCGC CGCAGTACGT GATCATGGAA GGTGACACAC TCAAGCCGCT GAAGGTAGTG TCCACACGCG GCATGACCGT CGACAACGAG TACCACCCCG AGCCGCGTGT CGCATCGATC GTTGCCAGCC ATTTCCGTCC CGAGTTCGTC ATCAACGCGA AGGAAACAGG CAAGATCCTG ATGGTCGATT ATTCGGATCT GAAGAACCTG AAGACCACCA CGATCGATTC CGCCAAGTTC CTTCATGACG GTGGTTTCGA CTCCACGGGT CGCTACTTCC TGGTGGCCGC GAACGCATCG AACAAGATCG CTGTCGTGGA TACCAAGGAA GACAAGCTGG CCGCGCTGGT CGATGTCGGC AAGACCCCGC ACCCGGGACG TGGCGCGAAC TTCGTGCATC CGAAGTTCGG TCCGGTCTGG GCCACGAGCC ATCTCGGCGA CGAAACCATC AGCCTGATCG GCACCGATCC CATCAACCAC AAGGCGCAGG CCTGGAAGGT GGTCGAAACG CTCAAGGGAC AGGGCGGTGG CTCGCTGTTC ATCAAGACCA ATCCGAAGTC GCACAACCTG TGGGTGGATA CGCCGCTCAA TCCCGACGCG AAGCTGAACC AGAGCGTGGC GGTGTTCGAT ACGCAGAAGC TGGAAGACGG TTACAAGGTG CTGCCGATCG CCGAATGGGC GAACCTGAAG GGCGAAGGCG CGAAGCGTGT GGTGCAGGCC GAGTACAACC AGGCCGGTGA TGAAGTCTGG TTCTCGGTCT GGGGTACCAA GGATGGCGAG TCCGCGCTGG TCGTGGTCGA TGACAAGACC CGCAAGCTCA AGACCGTGAT CAAGGACCCG CGTCTGATTA CCCCGACGGG CAAGTTCAAC GCGCACAACA CACAACACGA CGTCTATTGA
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Protein sequence | MKAKSWMFPA LAAMPLFFWS AHGSAQTAPT QNPEPKLTAE EFNHARQIYF ERCAGCHGVL RKGATGKPLT PDITRARGTE YLKTFIKYGS PAGMPNWGTS GDLTDPEVDL MARYIQLDPP TPPEFSLADI EKSRKDIVPV AKRPTRKMNN YNLQNLFSVT LRDSGEVALI DGDSKQIINI VKTGYAVHIS RMSASGRYLY VIGRDARLNL IDLWLPKPDN VAEVKIGLEA RSVETSKYKG YEDKYAVAGS YWPPQYVIME GDTLKPLKVV STRGMTVDNE YHPEPRVASI VASHFRPEFV INAKETGKIL MVDYSDLKNL KTTTIDSAKF LHDGGFDSTG RYFLVAANAS NKIAVVDTKE DKLAALVDVG KTPHPGRGAN FVHPKFGPVW ATSHLGDETI SLIGTDPINH KAQAWKVVET LKGQGGGSLF IKTNPKSHNL WVDTPLNPDA KLNQSVAVFD TQKLEDGYKV LPIAEWANLK GEGAKRVVQA EYNQAGDEVW FSVWGTKDGE SALVVVDDKT RKLKTVIKDP RLITPTGKFN AHNTQHDVY
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