| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3169 |
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| Symbol | |
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| ID | 4040003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3441820 |
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| End bp | 3443301 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637978574 |
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| Product | cytochrome d1, heme region |
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| Protein accession | YP_585310 |
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| Protein GI | 94312100 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACG CGATTCTCTG GACGTGCATG TTTGCTTCAT TCGTCGCCAA CGCGGAGACG
ACAATCGATC CCGCCAGCAT CTACAGCAGC CACTGTGCGG CTTGCCATGG TGCCGATCGT
CTGGGCGGCA TGGGTCCGGC GCTGTTGCCG GAAAGCCTGG AGCGGCTGCG GCCCGACGAC
TTGCTCGACG TGCTGCGCAA CGGTCGTCCG GCCACGCAGA TGCAAGGCTT CTCCAAAGAA
CTCGGAGACG CCACGATCAA GCAGATGGCA ACCTGGCTGC GCTCCGCACC CGCGGCCACG
CCGCGCTGGG AGCAGGCGGA CATCGAGGCA TCGCGCATCG TCTATCACGC ACCCGGCACG
CTGCCGGCCC GGCCCGTTTT CAGTGCCGAT CCTTCCAACC TGTTTCTGGT CGTCGAGGCC
GGGACGCATC ACGTCAGCGT GCTCGACGGC GACAAACTCG AACCGATTCA CCGATTCACC
ACCCGGTTCG CGCTGCACGG CGGGCCGAAG TTCAGCAGTG ACGGACGCTA TGTGTACATG
GCGAGCCGCG ATGGCTGGGT CAGCAAGTAC GACCTCTGGA ACCTGAAGCT CGTGGCCGAG
GTCCGCGCCG GCATGAATAC CCGCAACCTT GCGGTCAGCG AAGATGGCGA GTGGGTGATG
GTCGGCAATA CGTTGCCCCA GACGCTGGTG CTGCTGCGCG CTTCGGATCT GTCACTGCAG
CGTATCTATC CGGTCACGGG CGCGGGCGGG AAGTCCTCCC GCGTTTCAGC CGTTTACGAC
GCCGCGCCGC GTGGGTCGTT CATCGTCGCG CTGCGCGATA TTCCCGAGGT CTGGGAGATC
CCATACATCG GCAAGAAGAC GTTCGAACCG CGCGTGATCG AACTCACGGA CGTGCTCGAC
GACTTCTTCT TCGATCAGCC GTATCGCCAC ATTCTTGGCG CCTCGCGCAC GGCCACGGGT
CAGGTGATCG ATCTCGACGC AGGCCGGAAA GTGGCGGACC TCGCGCTGAC CGGCATGCCG
CATCTTGGCA GCGGTATTAC GTGGAAACGC AACGGCCGCG AAGTCATGGC ATCCCCGAAC
CTGAAGCAGG GCGCGATCAG CGTGATCGAC ATGCAGTCCT GGAAGACCGT GGCGACGATC
CCGACCAATG GGCCGGGCTT CTTCCTGCGT AGCCACGAAG CCACGCCATA CGCATGGACC
GACGCGATGA TGAGTCCGAA ACGCGACACA TTGCAGGTGA TCGACAAGCA GACACTCGCC
ATCGTTGGCA ATGTCACGCC GTCTCCGGGA CGCACCGCGG CGCACGTGGA GTTCACCCGT
GATGGTCGAT ATGCGCTGGT CAGCCTGATG GAAGCCGATG GGGCGATCGT CGTCTACGAC
GCCAGGACGC TGAAGGAAAT CAAGCGACTG CCGATGGACA AGCCGATCGG CAAGTACAAC
GTATTCAACA AGACTACGCG CTCGTCTGGC ACGAGCCATT GA
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| Protein sequence | MKHAILWTCM FASFVANAET TIDPASIYSS HCAACHGADR LGGMGPALLP ESLERLRPDD
LLDVLRNGRP ATQMQGFSKE LGDATIKQMA TWLRSAPAAT PRWEQADIEA SRIVYHAPGT
LPARPVFSAD PSNLFLVVEA GTHHVSVLDG DKLEPIHRFT TRFALHGGPK FSSDGRYVYM
ASRDGWVSKY DLWNLKLVAE VRAGMNTRNL AVSEDGEWVM VGNTLPQTLV LLRASDLSLQ
RIYPVTGAGG KSSRVSAVYD AAPRGSFIVA LRDIPEVWEI PYIGKKTFEP RVIELTDVLD
DFFFDQPYRH ILGASRTATG QVIDLDAGRK VADLALTGMP HLGSGITWKR NGREVMASPN
LKQGAISVID MQSWKTVATI PTNGPGFFLR SHEATPYAWT DAMMSPKRDT LQVIDKQTLA
IVGNVTPSPG RTAAHVEFTR DGRYALVSLM EADGAIVVYD ARTLKEIKRL PMDKPIGKYN
VFNKTTRSSG TSH
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