| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3158 |
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| Symbol | |
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| ID | 4039987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3422107 |
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| End bp | 3423714 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637978558 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_585299 |
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| Protein GI | 94312089 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTTC GTCACATCAG GAAGGCCATC GGCAAGACGA TCAACACCGT CCTGCTGACC
AGCGCCCTCG GCCTCGGTTT GGCCGCGCCA GTTCACGCCG TGGATCTGAA GATCGCCATG
AGTTCGCCAC CGACCTCGAT GGATCCACAT TTCTACAACC TTTTCTCGAA CATCAACGTG
TCGGAGCACG TGTTCGAGAC CCTGATCAAG CTTGATCCGG ACAGCCGCGT CATTCCTGGA
CTTGCCGAGT CGTGGAAGCT CGTCAACAAC CTGACCTGGG AATTCAAGAT CCGCAAGGGC
GTCAAGTGGC ATGACGGCAC GGAGCTGACC ACCGAGGACA TCGCCTGGTC ACTGGACCGG
CCTGCCACGA TCCTCAACAG CCCGGGCAAG TTCGATGTGT ACACCAAGGC GATCATCAAC
AAGAAGATCA TCGACAAGTA CACGATCCAG CTGACCACCA ACCAGCCGTA TCCGTTGATG
CTCAACGACC TGACGGCGGT GTTCATGGTG CAGAAGAAGG CCACGCAGGG CCTGTCTTCC
GACGACTTCG CGCAGGGCAA GGGCATGATC GGCACCGGGC CGTTCAAGTT CGTCAGCTAC
GCGCGCGACG ATCGCGTCGA GCTGGTCAGG AACCCCGACT ACTGGGGGCC GAAGCCGGCC
TGGGATAAGG TGACGCTGCG CTTCATCCCG AACCCGGCCA CGCGTCTGGC GGCGCTGCTG
TCGGGCGATG TGCAGGCGAT CGAGAACGTG CCGACGCCGG ACCTGCCCAA AGTCCGCAAC
GATCCCAAGC TTTCGTTCTT CTCGAAGATC TCGCATCGCG TGATCTATCT GTACTTCGAC
GCCAAACGGG ACAAGTCACC GTTCGTGACC ACGAAGGACG GCCAGGCGAT GGACAAGAAT
CCGCTCAAGG ACCCGCGCGT GCGTCTTGCC ATCAGCACGG CCATCAATCG CCAGGGCATC
AAGGATCGTC TGATGGAGGG GCTGGCGGAG CCAACCAATA ACCTCGTGCC GCCGACGATG
TTCGGCTACA ACCCGGCGCT GAAGACGATC AAGTACGACC CCGAGGCGGC GAAGAAGATG
CTAGCCGAGG CGGGCTACCC CAATGGCTTC GGGTTGACGT TGCATACGCC GAACAACCGG
TATGTCAACG ACGAGAAGAT CGCGCAGACC ATCGCGCAGA ACCTGACGCG CATTGGCATC
AACACCAAGG TGGAAGGGAT GCCGATGGCC ACCTACTCGG CGAAGGGGAT CAAGCACGAA
TGGTCGTTCG GCCTGCTGGG CTGGGGCGCC CAGACCGGTG AGGTCAGCTC GCCGCTGCGC
GCGCTGCTAG CCTGCGAGGA CTCCAAGAAG GGCTTCGGTA CCACCAACTG GGGCGAGTAC
TGCAATCCGA AGATGGATGT GGTGCTGGAG AAGGCACTGG CCACCGTGGA TGACAATGAG
CGCTCGAAGC TTCTGCAGGA AGCCACGGCT ATCGCCATCC TTGATGGTGG CATCATTCCG
ATCCATCACC AGGTGACCAC GTGGGCCACG CAGAAGGGCA TCGTGTACAT CCCCCGTACC
GACGAACGGA CATACGCGCA CAACTTCAAG CCGGCCGGCG CGCAATGA
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| Protein sequence | MSLRHIRKAI GKTINTVLLT SALGLGLAAP VHAVDLKIAM SSPPTSMDPH FYNLFSNINV
SEHVFETLIK LDPDSRVIPG LAESWKLVNN LTWEFKIRKG VKWHDGTELT TEDIAWSLDR
PATILNSPGK FDVYTKAIIN KKIIDKYTIQ LTTNQPYPLM LNDLTAVFMV QKKATQGLSS
DDFAQGKGMI GTGPFKFVSY ARDDRVELVR NPDYWGPKPA WDKVTLRFIP NPATRLAALL
SGDVQAIENV PTPDLPKVRN DPKLSFFSKI SHRVIYLYFD AKRDKSPFVT TKDGQAMDKN
PLKDPRVRLA ISTAINRQGI KDRLMEGLAE PTNNLVPPTM FGYNPALKTI KYDPEAAKKM
LAEAGYPNGF GLTLHTPNNR YVNDEKIAQT IAQNLTRIGI NTKVEGMPMA TYSAKGIKHE
WSFGLLGWGA QTGEVSSPLR ALLACEDSKK GFGTTNWGEY CNPKMDVVLE KALATVDDNE
RSKLLQEATA IAILDGGIIP IHHQVTTWAT QKGIVYIPRT DERTYAHNFK PAGAQ
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