Gene Rmet_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3145 
Symbol 
ID4039974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3408486 
End bp3409487 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID637978545 
Producthypothetical protein 
Protein accessionYP_585286 
Protein GI94312076 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.261814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACC CACGCCGGCG CGCTGTCGCG CTGCTGCTTT CGATTGCCCT GAGCCCGCTG 
GCGGCCGCAT CGGCCCACGC CGCCGACGCT TATCCCACCA AGCCAATCCG CCTGGTCGTG
CCATTCCCGG CCGGTGGCAC CACTGACATC CTGGCGCGCG CGGTCTCTGC CGAATTGTCG
AAGCTGCCCG GCTGGAACGT GGTGGTCGAC AACAAACCCG GCGCTGGCGG CAATATCGGC
TCGGATATCG TCGCGAAGTC GGCGCCGGAT GGCTACACGC TGCTGATGGG CACCGTAGGG
ACGCACGGCA TCAACCAGTC GCTGTACGGC AAGCTGCCGT ACGACCCGAT CAAGGACTTC
GCGCCGATCA CCGAGGTGGC TTCGGTCCCC AATGTGCTGG AGGTGAATCC CGCCTTCGCG
CAGCAGAACA AGATCAATAC CGTCAACGAT CTCATTGCCT ACGCACGGGC CAATCCGGGC
AAGCTGAACA TGGCGTCGAG CGGCAACGGC ACGTCGATCC ACCTGGCCGG CGAACTGTTC
AAGACCCAGA CCAAGACCTA CATGGTCCAC TTCCCGTACC GTGGCAGCGG CCCCGCGCTG
ACCGACATGA CGGGCGGGAC GATGCAGGTG ATGTTCGACA ACCTGCCTTC CTCCATGGCG
CTGATCAAGG CCGGCAAGCT CAAGGCGCTG GCCGTGACCA GCGCCAAGCC GTCGCCGGCG
CTGCCCGGCG TGCCCACCGT GGCGGCCGCG GCGAACCTGC CGAACTATGA GGCCAGTTCG
TGGTTCGGGC TGCTGGCACC GGCTGGCACG TCGCCGGAGA TCATCCATCG CATCCAGCAG
GAAGTCGCCA AGAGCCTGAG CACCCCCGCC GTGCGCGAAC GGATGATGGC CCAGGGCGCC
GATCCGATCG GCAACACACC CGACCAGTTC GCCGCGCTCA TCCGCGCAGA ACACATCAAA
TGGGCCAAGG TGGTCAAGGA TTCCGGCGCA AAGGTCGACT GA
 
Protein sequence
MSHPRRRAVA LLLSIALSPL AAASAHAADA YPTKPIRLVV PFPAGGTTDI LARAVSAELS 
KLPGWNVVVD NKPGAGGNIG SDIVAKSAPD GYTLLMGTVG THGINQSLYG KLPYDPIKDF
APITEVASVP NVLEVNPAFA QQNKINTVND LIAYARANPG KLNMASSGNG TSIHLAGELF
KTQTKTYMVH FPYRGSGPAL TDMTGGTMQV MFDNLPSSMA LIKAGKLKAL AVTSAKPSPA
LPGVPTVAAA ANLPNYEASS WFGLLAPAGT SPEIIHRIQQ EVAKSLSTPA VRERMMAQGA
DPIGNTPDQF AALIRAEHIK WAKVVKDSGA KVD