Gene Rmet_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3138 
Symbol 
ID4039967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3402642 
End bp3403265 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID637978538 
Productputative ubiquinone biosynthesis protein 
Protein accessionYP_585279 
Protein GI94312069 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.176892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGT TGATCCGAGA ATTCGATGTC GCGTTGCGCG CGATTGCCGG TGCGACCCGC 
GCGGAGCGCG CCAACCCTGC AGACAGGCTG GCTCCGGAAA CGGAGCAGAT GAACCCCGAG
GAGCGTCGCC ACGTATCCGG CCTCATGCGC ATCAACCATG TTGGAGAGGT TTGCGCCCAG
GCCCTCTACC AGGCGCAGAA GCTGACCGCG CGAACGCCGG CCGTGCGCGC GCAGATGGAT
GCTGCCGCTA AAGAGGAAGA GGATCATCTG GCCTGGTGCG CGGACCGCCT GCGTGAACTG
GGCTCGCGTC CGAGCCTGCT GAATCCCGTC TGGTATGCCG GCGCGTTCGC GATCGGCGTT
TTGGCGGGAC GCGCCGGCGA CAAGGTCAGC CTTGGCTTCG TGGCCGAGAC CGAGCGTCAG
GTCGAGCATC ATCTGACCAG CCACCTCGAC CGCTTGCCCA CCACGGACAG CCGCTCGCGC
GCAATCCTTG AACAGATGCG CGACGACGAG GTCCGCCACG GCGATGCCGC GAGGAACGCA
GGGGGTATCC CACTGCCGGG ACCAGTTCGC GCATTGATGC AAGTCGCATC GCGCGTCATG
ACCACCACCG CCTATCGCAT CTGA
 
Protein sequence
MDTLIREFDV ALRAIAGATR AERANPADRL APETEQMNPE ERRHVSGLMR INHVGEVCAQ 
ALYQAQKLTA RTPAVRAQMD AAAKEEEDHL AWCADRLREL GSRPSLLNPV WYAGAFAIGV
LAGRAGDKVS LGFVAETERQ VEHHLTSHLD RLPTTDSRSR AILEQMRDDE VRHGDAARNA
GGIPLPGPVR ALMQVASRVM TTTAYRI