| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3132 |
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| Symbol | |
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| ID | 4039961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3395661 |
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| End bp | 3397061 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978532 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_585273 |
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| Protein GI | 94312063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC AACCGATGAC GACTTTGCAG CAAGCCGCTG GCTGGATTGC CGGCGCAAGT
ATTTCCGGAG ATGCTACGTG CTCGTTTTCG CGCGTGCATA CCGACAGCCG TACCGTCGAG
CCCGGCGACC TGTTCGTCGC GCTCAAGGGT GAGCGTTTCG ACGCCCACGA TTTTCTGGCC
GATGTGGTCG CGCGCGGCGC CGCCGCGGTG ATGGTGAGCC GCAAGGTCGA CGTCGACGTG
CCGGCGCTGA TCGTGCCCGA CACGCGCACC GGCCTCGGCC AGTTGGCCAC GGGTTGGCGC
CGCACGTTCA CGCCGCCGAC GGTGGCCGTG ACCGGCAGCA ATGGCAAGAC CACGGTCAAG
GAAATGATCG CGGCGATCTT TGCCGCGGCC GTGGGTGAAG GCGATCGTCT GGCAACGGGT
GGCAACCTGA ACAACGACAT CGGCCTGCCA CTGACCGTGC TGCGCCTGCG CGCGCATCAC
AAGCTGGCCG TGCTCGAGCT GGGCATGAAT CACCCGGGTG AGACGATCTA CCTGGCCGGC
ATCGCCCAGC CGACCGTGGC GGTGGTCACC AACGCCCAGC GCGAGCACCA GGAGTTCATG
GTCAGCGTGG AGGCCGTGGC GCATGAACAC GCCAGCGCCA TCGCCGCGCT GCCCGCCGAT
GGCGTGGCCG TGTTTCCGGT CGATGCCGAA AGCGGTGGCG CCTATGCGGC CATCTGGCGC
CAGGCCGCTG GCACACGGAA GGTGCTGTCG TTTGGGACCG ATGCTTCGGC CGACGTACGG
GCTACGGTGT CGCTGGAGAA TGGCGTGCAG GTGCTGGATG TGACCGCGCC GGACCGGCGC
TTCACGCTGC GCCTGCATGT GCTGGGTGTG CACAACGTGC GCAACGCGCT GGCGGCTACG
GCGTGCGCGC TGGCCGCAGG CGTCGATGTG GCGGCAATCC AGGCGGGCAT CGCCGGCTTC
ACCGCCGTGA AGGGCCGCCT GCAGGTGAAG CACACCCCGG CGGGCACCGT CGTTATCGAC
GACACGTACA ACGCCAACCC GGATTCGATG CGTGCTGCAA TCGACGTGCT GGCCGGATTC
GCGACCCCGC GCCTGCTGGT GCTGGGCGAT ATGGGCGAGG TAGGGGATCA GGGTCCGATG
TTCCACACCG AGATCGGTGC GTACGCGCGC GAGCGCGGCA TCGACGCGCT CTGGGCAACA
GGCGAACTCG CACCGCACGC GGTGCAGGCA TATGGCGGTG GCGCACGGTA TTTCGCTCGC
GCGGAAGACC TGGCGCAGGC GCTGGAGGCA GACAAGGAGG GCACGGTGGC CAATGCAGCG
GCCGTGCTGG TGAAGGGATC GCGCTTCATG CGCATGGAAC GGATGGTCGA TGCGCTTGTC
GCATCACCTT CCGCTCATTA A
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| Protein sequence | MNRQPMTTLQ QAAGWIAGAS ISGDATCSFS RVHTDSRTVE PGDLFVALKG ERFDAHDFLA
DVVARGAAAV MVSRKVDVDV PALIVPDTRT GLGQLATGWR RTFTPPTVAV TGSNGKTTVK
EMIAAIFAAA VGEGDRLATG GNLNNDIGLP LTVLRLRAHH KLAVLELGMN HPGETIYLAG
IAQPTVAVVT NAQREHQEFM VSVEAVAHEH ASAIAALPAD GVAVFPVDAE SGGAYAAIWR
QAAGTRKVLS FGTDASADVR ATVSLENGVQ VLDVTAPDRR FTLRLHVLGV HNVRNALAAT
ACALAAGVDV AAIQAGIAGF TAVKGRLQVK HTPAGTVVID DTYNANPDSM RAAIDVLAGF
ATPRLLVLGD MGEVGDQGPM FHTEIGAYAR ERGIDALWAT GELAPHAVQA YGGGARYFAR
AEDLAQALEA DKEGTVANAA AVLVKGSRFM RMERMVDALV ASPSAH
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