Gene Rmet_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3131 
SymbolmraY 
ID4039960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3394476 
End bp3395645 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID637978531 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_585272 
Protein GI94312062 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTGA CACTGGCCCA GTGGCTGCAG AACGACTACA GCTTCCTGCG GGTCGTCAAC 
TATCTGACTT TCCGCGCGGT GATGGCCAAC GTCACCGCGC TGGTGATCGG CCTGGGTTTC
GGGCCGTGGG TGATTCGCCG CCTTACCGAA CTGAAGATCG GTCAGGCCGT GCGCACGATC
GGCCCCCAGA CGCACCTGGT GAAGGCCGGC ACGCCGACCA TGGGTGGCGT GCTGGTGCTG
ATCTCGATCG CGATCTCGAC GTTGCTCTGG TGTGACTGGG GCAACCGCTT CATCTGGGTT
GTGCTGCTCG TGACGCTGGG CTATGGCGCG ATTGGCTGGG TCGATGACTA CCGCAAGGTG
GTCTATCGCG ATCCGCGCGG CATGTCGAGC CGCGAGAAAT TCTTCTGGCA GACGCTGATC
GGTCTGGTTG CCGCCGTGTA TCTGGCGTTC TCGGTGTCCG AGGCCAGCAA CGTGCGCATC
TGGAGTCTGT TCCTGAGCTG GATCGAGGGC GGCATGTTCG CCGACGTGCC GTACAAGATG
AACCTGATCG TGCCCTTCTT CAAGGAAGTG AGCTACCCGC TCGGCGTGAC CGGTTTCATC
GTGCTGACCT ATCTGGTGAT CGTTGGCTCG AGCAACGCGG TGAACCTGAC CGACGGTCTG
GACGGCCTCG TGATCATGCC CGTGGTGCTG GTGGGCGGCG GCCTTGGCGT GTTTGCCTAT
GTGATGGGCA ATGCGGTCTA CAGCAAGTAC CTGCTGTTCC CGCACATTCC CGGCGCGGGC
GAGCTGCTGA TCTTCTGCTC GGCGATGGCC GGCGCGGGAC TGGCGTTCCT CTGGTTCAAC
GCCCACCCGG CACGCGTGTT CATGGGCGAC GTTGGCGCGC TGGCGCTGGG CGGGGCGCTG
GGCACGGTAG CGGTGATCGT GCGCCAGGAG ATCGTGCTGT TCGTGATGGG CGGGATCTTC
GTGGTGGAAA CGCTGTCAGT GATGCTCCAG GTGTCGTGGT TCAAGTTCAC GAAGCGTCGC
TACGGCGAAG GCCGCCGGCT GTTCCGCATG GCGCCGCTGC ATCACCACTT CGAACTGGGC
GGCTGGAAGG AAACACAAGT GACGGTGCGC TTCTGGATCA TCACGATGCT GCTGGTGCTG
ATCGGGTTGT CGTCGCTGAA GCTGCGCTGA
 
Protein sequence
MLLTLAQWLQ NDYSFLRVVN YLTFRAVMAN VTALVIGLGF GPWVIRRLTE LKIGQAVRTI 
GPQTHLVKAG TPTMGGVLVL ISIAISTLLW CDWGNRFIWV VLLVTLGYGA IGWVDDYRKV
VYRDPRGMSS REKFFWQTLI GLVAAVYLAF SVSEASNVRI WSLFLSWIEG GMFADVPYKM
NLIVPFFKEV SYPLGVTGFI VLTYLVIVGS SNAVNLTDGL DGLVIMPVVL VGGGLGVFAY
VMGNAVYSKY LLFPHIPGAG ELLIFCSAMA GAGLAFLWFN AHPARVFMGD VGALALGGAL
GTVAVIVRQE IVLFVMGGIF VVETLSVMLQ VSWFKFTKRR YGEGRRLFRM APLHHHFELG
GWKETQVTVR FWIITMLLVL IGLSSLKLR