| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3130 |
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| Symbol | murD |
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| ID | 4039959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3392911 |
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| End bp | 3394425 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637978530 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_585271 |
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| Protein GI | 94312061 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGGCG TGTTGCAGAA ACCTCATGTG CTGGTACTTG GCCTCGGTGA ATCGGGGCTG
GCCATGGCAC GCTGGTGCGG CCTGAATGGC TGCCGCGTGC GCGTGGCCGA CACACGCGAG
GCGCCCGCCA ACCTTGTCTT CCTGCAGGCG GAACTGACCA CGGCCCAGTT CATGGGCGGG
CAGTTCACCG AGAACCTGCT CGACGATATC GGTCTGGTGG CGATCAGCCC CGGGCTGTCC
CCGCTCGAAC CCAATACCAG GGCGCTGCTC GAGGCGGCGC AGGCACGCAG TATTCCTGTC
TGGGGCGAGA TCGAACTGTT CGCCCAGGCG ATTGGCTACC TGGAGGCCAC GTCGGGCTAC
GCCCCGCGCG TGCTGGCCAT CACCGGTACC AACGGCAAGA CCACGACCAC CGCGCTGACT
GGCCGGCTGA TCGAGCGCGC AGGCAAGACC GTGGGCGTGG CAGGCAATAT CAGCCCGTCT
GCGCTGGACA AGCTGTCGGC CTGCATCGCC AGCGCCACGT TGCCCGATGT CTGGGTGCTC
GAACTGTCCA GCTTCCAGCT CGAATACACG TTCTCGCTGG CGCCGCACGC GGCCACGGTG
CTCAATGTCA CGCAGGACCA CCTCGACTGG CACGGCAGCA TGGAAGCGTA TGCCGCCGCC
AAGGCGCGCA TCTTCGGCCC GGCCGAGAAG GGCTGCCTGC AGGTGCTCAA CCGGCAGGAC
CCGCTGACGA TGAACATGGC CCGCCGCGGC ACCACGCTGG TCACGTTCGG CACTGACCTG
CCCGAGACGC CGGGCAGCTA CGGCGTGCTG CGCGAAGGCG GGATGCCATG GCTCGTGCTG
GCCGAGCCCG ACACCGAAGC CGATGCCGAG CAGAAGCCGC GCCGCCGCAA GAAGGACGAT
GTCGCCGCCG ACGCCGTCGT GCCGGTACGC CACAAGCGCC TGATGCCGGC CGACGCGCTG
CACATCCGCG GCATGCACAA CGCCACCAAC GCGATGGCCG CGCTGGCGCT GTGCCGCGCG
ATCGACCTGC CGCTCAACGC GCTGCTGCAC GGCCTGCGCG AGTATCGTGG CGAGCCGCAC
CGCGTGGAAT GGGTGGCAAC GATCGATGAA GTCGAATACT TCGACGACAG CAAGGGGACG
AACGTCGGCG CCACCGTGGC TGCACTGAGC GGGCTGGATA AGCACGTGGT GCTGATCGCC
GGTGGCGAGG GCAAGGGCCA GGATTTCTCG CCGCTGGTCG CGCCGGTGGC GCAATACGCG
CGCGCCGTGG TGCTGATCGG CAAGGATGCG GGCGCGCTGC GCGAGGCGCT GGGGGCTACC
GGCAAACCGC TGATCGACGC CGGCTCGCTG GAAGAAGCGG TAGAGAAATC CGCCAGCCTC
GCGGAAGCGG GCGACGTGGT GCTGCTGTCG CCGGCTTGCG CCAGCCTCGA CATGTTCCGT
AACTACGTGC ATCGCGCCCA GGTGTTCCGC GGCGCGGTGG AAGAACTGGC TTTGTCCCGG
GGGATCATGC CATGA
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| Protein sequence | MFGVLQKPHV LVLGLGESGL AMARWCGLNG CRVRVADTRE APANLVFLQA ELTTAQFMGG
QFTENLLDDI GLVAISPGLS PLEPNTRALL EAAQARSIPV WGEIELFAQA IGYLEATSGY
APRVLAITGT NGKTTTTALT GRLIERAGKT VGVAGNISPS ALDKLSACIA SATLPDVWVL
ELSSFQLEYT FSLAPHAATV LNVTQDHLDW HGSMEAYAAA KARIFGPAEK GCLQVLNRQD
PLTMNMARRG TTLVTFGTDL PETPGSYGVL REGGMPWLVL AEPDTEADAE QKPRRRKKDD
VAADAVVPVR HKRLMPADAL HIRGMHNATN AMAALALCRA IDLPLNALLH GLREYRGEPH
RVEWVATIDE VEYFDDSKGT NVGATVAALS GLDKHVVLIA GGEGKGQDFS PLVAPVAQYA
RAVVLIGKDA GALREALGAT GKPLIDAGSL EEAVEKSASL AEAGDVVLLS PACASLDMFR
NYVHRAQVFR GAVEELALSR GIMP
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