| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3127 |
|---|
| Symbol | murC |
|---|
| ID | 4039956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3389180 |
|---|
| End bp | 3390595 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637978527 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_585268 |
|---|
| Protein GI | 94312058 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATA TTGTCAAGAA CATCCACTTC GTAGGCATTG GCGGGGCCGG CATGAGCGGC
ATCGCCGAGG TCCTGCTGAA TCTGGGCTAC AAGGTCTCGG GTTCCGACGT GGGCAGCAAT
GCCGCCACGC GGCGCCTGGC TTCGCTCGGC GCGCGCGTGG CTCATGGCCA CGACGCGGAA
AACGTGACGG GCGCCAATGC CGTGGTGGTA TCCACCGCGG TGACCAACGA CAACCCCGAA
GTGCTGGCAG CCCGCGCCAG GCGTATCCCG GTGGTGCCGC GCGCGGTGAT GCTGGCCGAG
CTGATGCGCC TGAAGCAGGG CGTGGCTATC GCCGGCACCC ATGGCAAGAC CACCACGACC
AGCCTGGTGG CATCGGTGCT GGCCGAAGGC GGGCTAGATC CGACGTTCGT GATCGGTGGC
CGCCTGAATT CAGCCGGCGC TAACGCGCGG CTCGGCACGG GCGATTTCAT CGTCGCGGAA
GCCGACGAGT CCGACGCGTC GTTCCTGAAC CTGTTTCCGG TGATGGAAGT CATCACCAAT
ATCGACGCCG ACCACATGGA CACCTACGGG CATGATTTTG CCCGGCTCAA GCAGGCGTTC
GTGGAGTTTA CCCAGCGCCT GCCGTTCTAC GGCATTGCCG TGCTGTGTGT CGATGACCCG
AACGTGCGCG AGATCCTGCC GTTCGTGTCC AAGCCGGTGG TGCGCTACGG TTTTGCCGAG
GACGCGCAGA TTCGTGCGGT CAATGCGCGC GCCGTTGATG GACAGATGCA CTTCACCGTG
CTGCGCCAGC TCAATGGCCA CGCCGAGCCG CCGCTCGACA TCGTGCTGAA CCTGCCGGGG
ATTCACAACG TCCAGAACGC GCTGGCCGCC ATCGCGATTG CCACCGAACT CGAAGTGCCG
GACGCGTCGA TCGTCAAGGC GCTGCGCGAG TTTCACGGCG TGGGCCGCCG CTTCCAGCGC
TACGGCGAGG TGGCGACGCC CGACGGTTCG GGCACGTTCA CGCTGGTCGA CGATTACGGC
CATCACCCGG TGGAGATGGC CGCGACGCTG GCTGCCGCGC GCGGCGCGTT CCCGGACCGC
CGCCTGGTGC TGGCATTCCA GCCCCATCGC TTCACACGCA CGCGCGACTG TTTCGAGGAC
TTCGTCAAGG TGCTGGGCAC CGTCGACGCG CTGCTGCTGG CGGAGGTGTA CGCCGCCGGC
GAATCGCCGA TCGTCGCGGC CGATGGCCGC GCGCTGACGC GCGCGCTGCG CGTTGCAAAC
AAGGTAGAAC CCGTTTTTGT CGAGCAGATC GAGGACATGC CCCAGGCCAT CCTGAATGCC
GTACGGCCCG GCGATGTGGT CGTAACCATG GGCGCTGGCT CGATCGGCGC AGTGCCGGGC
CAGTTGGTGT CGCATCAACA AGGGGGGCAG CAATGA
|
|---|
| Protein sequence | MKHIVKNIHF VGIGGAGMSG IAEVLLNLGY KVSGSDVGSN AATRRLASLG ARVAHGHDAE
NVTGANAVVV STAVTNDNPE VLAARARRIP VVPRAVMLAE LMRLKQGVAI AGTHGKTTTT
SLVASVLAEG GLDPTFVIGG RLNSAGANAR LGTGDFIVAE ADESDASFLN LFPVMEVITN
IDADHMDTYG HDFARLKQAF VEFTQRLPFY GIAVLCVDDP NVREILPFVS KPVVRYGFAE
DAQIRAVNAR AVDGQMHFTV LRQLNGHAEP PLDIVLNLPG IHNVQNALAA IAIATELEVP
DASIVKALRE FHGVGRRFQR YGEVATPDGS GTFTLVDDYG HHPVEMAATL AAARGAFPDR
RLVLAFQPHR FTRTRDCFED FVKVLGTVDA LLLAEVYAAG ESPIVAADGR ALTRALRVAN
KVEPVFVEQI EDMPQAILNA VRPGDVVVTM GAGSIGAVPG QLVSHQQGGQ Q
|
|---|
| |