| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3126 |
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| Symbol | ddl |
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| ID | 4039955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3388200 |
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| End bp | 3389183 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978526 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_585267 |
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| Protein GI | 94312057 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTCG TCGCCCATCC CAATATCGAT CCGAAGTCGC TGGGCAAGGT TGGCGTGCTG
CTGGGTGGCA AGTCCGCCGA GCGCGAGATC TCGCTGCTGT CCGGTAACGG TGTGCTGGCC
GCGCTGAAGT CGCGCGGCGT CGATGCGCAT CCGTTCGATC CGGGCCTGCA GCCGATCAGC
GAACTGGCTG CCGCAGGTTT CGACCGCGTT TTTATCGCGC TGCACGGTCG CTACGGCGAA
GACGGCACGA TGCAGGGCCT GCTCGAGCAG CTTGGCATCC CCTATACCGG CAGCGGCGTG
CTGGCGTCGG CGCTGGCCAT GGACAAGCAG GCTACCAAAC GCCTGTGGAT GACGCACGGC
CTGGCTACGC CGCGCTTCGC GATGCTCTAC GCGAATACCG ATTTCGATGC CGTGGTTGCC
GATCTTGGCC TGCCGCTGAT CGTCAAGCCG GCCCGTGAAG GGTCGTCGAT CGGCCTGACC
AAGGTGATCG CCGCGGACCA GATGCGCGCT GCATTCGAGA AGGCCGCAGG GCTCGATGCC
GACGTGATCG CCGAGACTTT CATCGATGGC GCGGAGCTGA CTTGCCCGAT CGTGGGCGAG
GGTCCGACGG CCGAAGCGCT CCCAGTTATC AAGATTGTCG CGCCGGAGTC GAACTACGAC
TATCAAAATA AGTATTTTAC TGACGATACC CAATACCTGT GCCCCTCGAC ATTGCCCGAC
GCGCTGGAGC GCGAAGTGCG CGCGCTGGCC GTGGAGGCCT TCCGGGTGCT GGGGTGTCGC
GGCTGGGCCC GCGCGGACGT GATGCTGACG CGCGACGGCA AGCCTTATCT GCTTGAAATG
AATACGTCCC CCGGCATGAC CGGCCATTCG CTCGTGCCGA TGGCGGCGCG TGCGAATGGC
ATCAGCTATG AGGACTTCGT CATGCAGGTA CTGGCGGCAG CCACGCTGGA CCTGCATCCG
AATGAACACT GGAAACCCGA ATAA
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| Protein sequence | MSFVAHPNID PKSLGKVGVL LGGKSAEREI SLLSGNGVLA ALKSRGVDAH PFDPGLQPIS
ELAAAGFDRV FIALHGRYGE DGTMQGLLEQ LGIPYTGSGV LASALAMDKQ ATKRLWMTHG
LATPRFAMLY ANTDFDAVVA DLGLPLIVKP AREGSSIGLT KVIAADQMRA AFEKAAGLDA
DVIAETFIDG AELTCPIVGE GPTAEALPVI KIVAPESNYD YQNKYFTDDT QYLCPSTLPD
ALEREVRALA VEAFRVLGCR GWARADVMLT RDGKPYLLEM NTSPGMTGHS LVPMAARANG
ISYEDFVMQV LAAATLDLHP NEHWKPE
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