| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3121 |
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| Symbol | lpxC |
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| ID | 4039950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3382672 |
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| End bp | 3383589 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637978521 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_585262 |
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| Protein GI | 94312052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.6601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAAC AGCGCACTAT CAAATCCCTG GTGAAGACGG TTGGTATCGG TTTGCACTCG
GGCCGCAAAG TGACGCTGAC CCTGCGCCCG GCTCCGGCCG ATACCGGCAT CGTCTTTACC
CGCGTCGACC TGCCCGAGGC CGTGGAAATC CACGCGGCGG CTTCTGCCAT TGGTGATACC
CGCCTGGCAT CGGTGCTCCA GAAGGACGGC GCGCGCGTTT CGACCGTTGA ACACCTGATG
TCGGCCTGCG CCGGCCTGGG TGTCGACAAT CTTTATGTCG ACGTCGACGC CGAGGAAATT
CCGATCATGG ACGGCAGCGC GGCATCGTTC GTGTTCCTGC TGCAATCGGC GGGCATGGAA
GAGCAGCCTG CGGCCAAGCG TTTCATCCGC GTGAAGAAAG CCGTGGAAGT CCGCGATGGT
GACAAGCTGG CTCGCCTGGA GCCGTTCTTC GGCTTCAAGC TTGCCTTCAC GATCGACTTC
CGTCATCCCG CTGTCGACAA GACGGGTCAG ACGTTCACGA TCGACTTTGC CGACACCAGC
TACGTCCGTG AAATCGCCCG TGCCCGCACT TTCGGTTTTG CCCATGAAGT TGAGGCACTG
CGCGAGATGG GCCTGGCCCG TGGTGGCAGC CTCGACAACG CGATCGTGCT CGACGAGCAC
CGCATGTTGA ACAACGAGGA ACTGCGCTAT GGCGACGAGT TCGTCCGCCA CAAGATCCTC
GACGCGATCG GCGACCTGTA CGTGATCGGC CATCCGCTGA TTGCTTCATA TGTTGCGCAC
AAATCTGGCC ATGGCATGAA CAATCAGTTG CTGCGCGCGC TGCTGGCGGA CCAGGAAGCC
TACGAATTTG TGACCTTCGA CAAGGTCGAG GAAGCGCCCG TCGCGTTCCT GCCACAGGCT
CAGCCGGCAT TCGCCTGA
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| Protein sequence | MLKQRTIKSL VKTVGIGLHS GRKVTLTLRP APADTGIVFT RVDLPEAVEI HAAASAIGDT
RLASVLQKDG ARVSTVEHLM SACAGLGVDN LYVDVDAEEI PIMDGSAASF VFLLQSAGME
EQPAAKRFIR VKKAVEVRDG DKLARLEPFF GFKLAFTIDF RHPAVDKTGQ TFTIDFADTS
YVREIARART FGFAHEVEAL REMGLARGGS LDNAIVLDEH RMLNNEELRY GDEFVRHKIL
DAIGDLYVIG HPLIASYVAH KSGHGMNNQL LRALLADQEA YEFVTFDKVE EAPVAFLPQA
QPAFA
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