| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3118 |
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| Symbol | |
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| ID | 4039947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3377940 |
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| End bp | 3380732 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637978518 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_585259 |
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| Protein GI | 94312049 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.224374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG GCCTTCTCAA GAAAGTCTTC GGCAGCCGCA ACGAACGGCT GATTAAACAA
TATCGCCGCA CGGTCGAGCA GATCAATGCG CTCGAGCCGA AGTTCGAGAA GCTCTCGGAC
GACGAGTTGC GTGGCATGAC CGAGACATTC CGCCAGCGCC ATGCCGGCGG CGAGTCGCTC
GAGGCACTGC TGCCTGAGGC TTTCGCCGTC TGCCGCGAAG CCAGCAAGCG GATCATGAAG
ATGCGTCACT TCGACGTGCA GATGATCGGC GGCATGGTGC TGAACGACAA CAAGATTGCC
GAAATGCGCA CCGGTGAAGG CAAGACGCTG ACCGCCACGC TGGCCGTGTA TCTCAATGCG
CTGACCGGCA AGGGCGTGCA CGTGGTGACG GTCAACGACT ACCTGGCGCA GCGTGACGCC
GAGTGGATGG GGCGGCTGTA CAACTTCCTG GGCCTGTCGG TGGGCGTGAA CCTGTCGCAG
ATGCCACACG ATCAGAAGCA GATCGCGTAC AACGCGGACA TCACGTACGG CACCAACAAC
GAGTTTGGCT TCGACTATCT GCGCGACAAC ATGGTCTATG ACCCGTCGCA GCGCGTGCAG
CGTCCGTTGC ATTACGCGAT CGTCGACGAA GTGGACTCGA TCCTGATCGA CGAGGCGCGC
ACGCCGCTGA TCATCTCGGG CCAGGCCGAG AACCAGACCG ATCTCTACCA GCGCATGAAC
GGCATTCCGA AGCTGCTCGA GCGCCAGATC GGCGAGGAGA AGGCCGACGG TACCGGCGTC
GAGAAGCCTG GCGACTACTA CGTGGACGAG AAGGGCCATC AGGTCTATCT GACCGAGGCC
GGCCACGAGA AGGCCGAGCA GATCCTGTCC CAGCTCGGGC TGATCAGCGA GGGCGAATCG
CTCTACGCGC CCCAGAACAT TACGCTGATG CACCACCTGT ACGCCGCCCT GCGCGCGCAC
AGCCTGTTCC ATCGCGACCA GCACTATGTG GTGCAGAACG ACGAGGTCAT CATCGTCGAC
GAATTCACGG GCCGCCTGAT GACGGGCCGC CGCTGGTCCG ATGGCCTGCA CCAGGCCGTG
GAAGCCAAGG AAGGCGTGAC CGTCCAGCAG GAAAACCAGA CGCTGGCCAC CATCACGTTC
CAGAACTACT TCCGCATGTA CGAGAAGCTG GCCGGCATGA CCGGCACGGC CGACACGGAA
GCCTACGAGT TCCAGGAGAT CTACGGCCTC GAAGTCGTGG TGATCCCGAC CAACCGTCAG
GCCCAGCGCA AGGACCTGCA GGACCAGATC TACAAGACGT CGAAGGAACG CTACGACGCC
GTGGTGCGCG ATATCCGCGA CTGCTACGAC CGAGGCCAGC CGGTGCTGGT GGGCACGACG
TCGATCGAAA CGTCCGAGTA TCTGTCGGAC CTGCTGAACA AGGAAAAGCT GCCGCACCAG
GTGCTGAACG CCAAGCAGCA CGCGCGCGAA GCCGAGATCG TGGCGCAGGC CGGCCGACCC
AAGATGGTCA CGATCGCCAC CAACATGGCC GGTCGCGGTA CCGACATCGT GCTGGGCGGC
AACGTCGAGA AGCAGGCCGG TTTTATCGAA GCCGATGCCA ACCTGTCCGA TGCCGAGAAG
GCCGAGCGCA TCGCCAAGCT CAAGGATGAG TGGCAATCGC TGCACGACCA GGTCAAGGCG
GCTGGCGGCC TGCATATCGT CGGCACCGAG CGACACGAGT CGCGCCGGAT CGACAACCAG
CTTCGCGGCC GCGCCGGCCG TCAGGGCGAC CCGGGCTCGT CGCGCTTCTA TCTGTCGCTT
GACGACCAGC TCCTGCGTAT CTTCGCCGGC GACCGCGTGC GCGCGATCAT GGAACGTCTG
AAGATGCCTG AAGGCGAGCC GATCGAAGCC GGTATCGTCA CGCGCTCGAT CGAATCCGCG
CAGCGCAAGG TCGAGGGCCG CAACTTCGAC ATCCGCAAGC AACTGCTGCA GTACGACGAC
GTTGCGAACG ACCAGCGCAA GGAAATCTAC AAGCTCCGTA ACGACGTACT CGAATCGCAG
GACGTCGGCG ACATGGTGGC GAACCTGCGC GAGAGCGTGC TGGTGGAGGT GTTCCGCGAA
TACGTGCCCG CCGAGAGCAT GGAAGAGCAG TGGGACATTG CTGGCCTGGA ACAGCGCCTG
CGTGACGACT GGGGTCTGGA GCTGCCGCTG GCGAAGACCA TCGAAGGCGC GCAGAGCATC
GAGGATGAAG AGCTGCTGGA CATGATCCTG AAGGCAGCGC GCGAGCACTA CGACGCCAAG
GTGGCGCAAG TGGGCCGCGA GTCGTTCGCC GGCTTCGAGC GCTCGGTCAT GCTGCAAAGT
ATCGACACGC ACTGGCGCGA GCACCTGGCC GCGCTGGATC ACCTGCGTCA GGGCATCCAC
CTGCGCGGCT ATGCGCAAAA GGATCCGAAG CAGGAGTACA AGCGCGAATC GTTCGAACTG
TTCGCGCGCC TGCTGGACGT GATCAAGAGC GAAGTCACGC GCGTGGTATT CAACGTGCAT
ATCCAGTCGC CCGAGGAACT CGAACAGGCT TCGGAGCAGA TCGAGGAAGG CTTGGCGCAC
CTCGAGAACG TGCAATACAA GCATGACGAG TTCGCCGAGG GTGCCGAGCC TGTGGAGCAG
GCAGAGCCGG CACGCAGCAA CACGGCCGCC GCGGCGCTGG CCGCGATGGG CGGCGAAGCG
GCGCTGGCCG GCATGCCCAA GGTTGGCCGC AACGACCCGT GCCCGTGCGG TTCGGGCAAG
AAGTTCAAGC AGTGCCACGG CAAGCTGAGC TAA
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| Protein sequence | MITGLLKKVF GSRNERLIKQ YRRTVEQINA LEPKFEKLSD DELRGMTETF RQRHAGGESL
EALLPEAFAV CREASKRIMK MRHFDVQMIG GMVLNDNKIA EMRTGEGKTL TATLAVYLNA
LTGKGVHVVT VNDYLAQRDA EWMGRLYNFL GLSVGVNLSQ MPHDQKQIAY NADITYGTNN
EFGFDYLRDN MVYDPSQRVQ RPLHYAIVDE VDSILIDEAR TPLIISGQAE NQTDLYQRMN
GIPKLLERQI GEEKADGTGV EKPGDYYVDE KGHQVYLTEA GHEKAEQILS QLGLISEGES
LYAPQNITLM HHLYAALRAH SLFHRDQHYV VQNDEVIIVD EFTGRLMTGR RWSDGLHQAV
EAKEGVTVQQ ENQTLATITF QNYFRMYEKL AGMTGTADTE AYEFQEIYGL EVVVIPTNRQ
AQRKDLQDQI YKTSKERYDA VVRDIRDCYD RGQPVLVGTT SIETSEYLSD LLNKEKLPHQ
VLNAKQHARE AEIVAQAGRP KMVTIATNMA GRGTDIVLGG NVEKQAGFIE ADANLSDAEK
AERIAKLKDE WQSLHDQVKA AGGLHIVGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
DDQLLRIFAG DRVRAIMERL KMPEGEPIEA GIVTRSIESA QRKVEGRNFD IRKQLLQYDD
VANDQRKEIY KLRNDVLESQ DVGDMVANLR ESVLVEVFRE YVPAESMEEQ WDIAGLEQRL
RDDWGLELPL AKTIEGAQSI EDEELLDMIL KAAREHYDAK VAQVGRESFA GFERSVMLQS
IDTHWREHLA ALDHLRQGIH LRGYAQKDPK QEYKRESFEL FARLLDVIKS EVTRVVFNVH
IQSPEELEQA SEQIEEGLAH LENVQYKHDE FAEGAEPVEQ AEPARSNTAA AALAAMGGEA
ALAGMPKVGR NDPCPCGSGK KFKQCHGKLS
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