Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3110 |
Symbol | |
ID | 4039939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3370268 |
End bp | 3371137 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637978510 |
Product | type 4 prepilin peptidase 1 |
Protein accession | YP_585251 |
Protein GI | 94312041 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCTG TCCTGTCATC GCTGGCGGCG TTGCCGCCAG CTTTCCTTAT TGTCGCGGCA GGGGTGGTTG GCCTGATGGT CGGCAGTTTC CTCAACGTGG TGATCCATCG TCTGCCGAAG ATGATGGAGT ACGACGAGGC CAACTACATC GCGGAAATCC GTGGCGAACC GTTGCCGCAC CCCGAGCGCT ATAACCTGAT GGTGCCGCGA TCCGCGTGCC CGAAGTGCGG CCACCAGATC GCCCCCTGGG AGAACATCCC CGTCATCAGC TACCTGTTCC TGCGTGGCCG CTGCAAGGCC TGCAAGACGC CGATCGGCAT CCGCTATCCG CTCGTCGAGC TGATCACGGC GGCGCTCAGC GCCCTGGCGA TGTGGCACTT CGGTCCGACG GCGCAGGCGC TGGCCGCGAT CGTGATGACC TGGTCGCTGG TCGCGTTGTT CATGATCGAT GCCGACACCC AGCTTCTGCC AGACCAGATC ACGCTGCCGC TGCTATGGCT GGGCCTGCTG CTGAACCTGC AGGGCTTGTT CGCGCCGCTG GCGGATGCCG TCATCGGCGC TGCGGCGGGC TACCTGCTGC TGTGGAGCGT CTACTGGCTC TACAAGCTCG TGCGGGGCCG CGAGGGCATG GGCCACGGCG ATTTCAAGTT GATGGCGGCG CTTGGCGCAT GGTTCGGCTG GCAGGCACTG CCCGCGCTGA TCCTGATGTC GTCGGTGGTC GGTGCCGTGC TTGGCGGCGC GATGCTGGTC TTCCGCCGCA AGAGTAGTGA CACGACCTTC CCGTTTGGCC CGTACATCGT CGGTGCCGGG CTGATCGTGC TGTTCTTTGG CGCAGACGTA TTACCGCTGA CGCTGGTGGC CGGACACTAG
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Protein sequence | MQAVLSSLAA LPPAFLIVAA GVVGLMVGSF LNVVIHRLPK MMEYDEANYI AEIRGEPLPH PERYNLMVPR SACPKCGHQI APWENIPVIS YLFLRGRCKA CKTPIGIRYP LVELITAALS ALAMWHFGPT AQALAAIVMT WSLVALFMID ADTQLLPDQI TLPLLWLGLL LNLQGLFAPL ADAVIGAAAG YLLLWSVYWL YKLVRGREGM GHGDFKLMAA LGAWFGWQAL PALILMSSVV GAVLGGAMLV FRRKSSDTTF PFGPYIVGAG LIVLFFGADV LPLTLVAGH
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