Gene Rmet_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3101 
Symbol 
ID4039929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3360913 
End bp3361638 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID637978500 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_585242 
Protein GI94312032 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC GTGAAGGCTT TCGCCCGAAC GTCGGCATCA TCCTCATCAA CGCACGCAAC 
GAGGTATTCT GGGGCAAGCG AATCGGCGAA CACTCCTGGC AGTTTCCGCA AGGTGGCATC
AAGTACGGCG AAACGCCGGA ACAGGCCATG TTCCGCGAAC TGCACGAAGA GGTCGGCCTG
CTTCCGGAGC ATGTCAGGAT CGTCGGTCGC ACGCGTGACT GGTTGCGTTA TGAGGTGCCG
GACAAGTTCA TCCGCCGCGA GATCCGCGGC CACTACAGGG GCCAGAAACA GATCTGGTTC
CTGCTGCGCA TGGTCTGCCG CGATTGCGAC ATCCACCTGC GCGCGACCGA TCATCCTGAG
TTCGACGCCT GGCGTTGGAG CCATTATTGG GTGCCGCTGG ATGCCGTCAT CGAGTTCAAG
CGCGACGTCT ACCAGATGGC GCTGACCGAG CTATCGCGCT TCCTGAACCG TGGACGCGTG
CCGCTGAGCC CCTACGGCAA CCATGGTAAC CATGGCCACC ACGGAGGCCC TGGCCGGCAT
GGCGACCAGG GACGGCCACC GAGGCCCGTG CCGCTTGAGG AGACCACCGT AACCGAGGTG
AGCGTCTCGG TCACGGCATC GGTTACCATT CAGGCGACCG TGCAGGAAGC GGCACATAGC
GATCTCGCGA CCGCGCCCGT TTCGCCGGCC AGTCCGGCAT CCACTCAACG GAGTTCCGAT
GATTAG
 
Protein sequence
MLDREGFRPN VGIILINARN EVFWGKRIGE HSWQFPQGGI KYGETPEQAM FRELHEEVGL 
LPEHVRIVGR TRDWLRYEVP DKFIRREIRG HYRGQKQIWF LLRMVCRDCD IHLRATDHPE
FDAWRWSHYW VPLDAVIEFK RDVYQMALTE LSRFLNRGRV PLSPYGNHGN HGHHGGPGRH
GDQGRPPRPV PLEETTVTEV SVSVTASVTI QATVQEAAHS DLATAPVSPA SPASTQRSSD
D