| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3096 |
|---|
| Symbol | |
|---|
| ID | 4039924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3354863 |
|---|
| End bp | 3355501 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637978495 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_585237 |
|---|
| Protein GI | 94312027 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTC CAGCCTTTCT TCCCAATGTG GCTGCCGGCT CCGGCGTGCT GCTGGCCTTC
TGCGCATTTG CGCTGGTCTC GTCCATCACC CCCGGCCCCA ACAATACGAT GGTGCTCGCG
TCCGGCGTCA ACTTTGGCAT TGCGCGCACC GTGCCGCACC TGCTCGGCAT CAGCATCGGC
TTCTCGGTCA TGGTGGCGCT GGTCGGCCTG GGGCTGGGTT CGATTTTCAC GGCCTGGCCG
TGGATGTGGG ACCTGCTGCG CGTGGTGGCC ACGGCCTATC TGGTGTGGCT GGCGTGGAAG
CTGGCGACGG CTGGCGGCGT GCAGGACCGT GAGGTGGCTC GGCCGATGAG CTTCCTGCGC
GCGGCCGCAT TCCAGTGGGT GAATCCGAAG GCGTGGGTGA TGGCAGTGGG GGCGTGCAGC
ACCTATGTGC TCGACGCCAA CATCTGGGTC AATGCCATGG CAATGGCTTG CCTGTTTGCG
GTGATCAACC TGCCCAGCGT GGCCACGTGG GCGGTGTTCG GTGCCGCGCT GCGCAGCCTG
CTGGCACGGC CGCGCGTGTT GCGCGTGTTC AATGTGACGA TGGCCCTGAT GCTGCTGGCC
TCGCTGCTGC CAATTCTCGG CGCCCACCCA CACGGGTAG
|
|---|
| Protein sequence | MTFPAFLPNV AAGSGVLLAF CAFALVSSIT PGPNNTMVLA SGVNFGIART VPHLLGISIG
FSVMVALVGL GLGSIFTAWP WMWDLLRVVA TAYLVWLAWK LATAGGVQDR EVARPMSFLR
AAAFQWVNPK AWVMAVGACS TYVLDANIWV NAMAMACLFA VINLPSVATW AVFGAALRSL
LARPRVLRVF NVTMALMLLA SLLPILGAHP HG
|
|---|
| |