| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3088 |
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| Symbol | |
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| ID | 4039916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3343511 |
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| End bp | 3346450 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978487 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_585229 |
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| Protein GI | 94312019 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGG CCCAAAACGA ACAACAAACC ACTGGCGTGA CTGGCGTTGC TGGCGCAGCA
GCCGGCATTG CGCAGCAGAG CCCCGTCGCT GCAGGCGTTA CCTATCAGGA CTACAAGCTG
ATCCGCCGTA ACGGCGCCGT GGTGTCGTTC GAGCCGAACA AGATTGCCGT GGCCATGACC
AAGGCATTCC TGGCCGTCAA CGGCGGCCAG GGCGCGGGAT CCGCGCGCGT GCGCGAGATC
GTCGAGCAAC TGACCCAGAA TGTGGTGCGC GCGCTGGTGC GCAGCCGTCC GAACGGCGGC
ACGTTCCATA TCGAAGACGT GCAGGATCAC GTGGAACTGG CGCTGATGCG CTCGGGCGAA
CATGAGGTGG CCCGCGCCTA CGTGCTGTAC CGCGAAAAGC GCACGCAGGA ACGTGCCCAG
GCCAACGCGC AGGCGGTGGC CCGCGTGCAG GAAGCCGGCG TGTCGTTCAA CGTGACCGAT
AACGGTGTGA CGTACCAGCT GGACTTGGTG GCGCTGCACG CGCTGATCGA CAACGCCTGC
AGCGGCCTCG GCAAGGCCGT CAGCGCAGAG CCGATCCTGA AGGAAACGCT CAAGAACCTG
TACGACGGCG TGCCGATGAC GCAGGTCTAC GACTCCGCCA TCCTGGCCGC GCGCACGCTG
ATCGAGAAGG ACCCGGCCTA CAGCCAGGTG ACCGCCCGTA TCCTGCTGCA CACGATCCGC
AAGGAAATCC TGGGCGCCGA AGTGACCCAG ACCGAGATGG CGACGAAGTA CGCCGAGTAC
TTCCCGAAGT TCATCGCCCG CGGTATCGAA GCCGAACTGC TCGACGAAAA GCTGGCCACG
TACGACCTGG CCCGCCTGGG CGCCGCGCTG GACGCCTCGC GCGACTTCCA GTTCAACTAC
CTGGGCCTGC AGACGCTGTA CGACCGCTAC TTCCTGCACG TGGACGAAGT GCGCATCGAA
ATGCCGCAGG CGTTCTTCAT GCGCGTGGCC ATGGGCCTGG CGCTGGAAGA GAAGGACCGT
GAAGCGCGCG CGATCGAGTT CTACCAGCTG CTGTCGTCGT TCGACTTCAT GTCGTCGACC
CCGACGCTGT TCAACTCGGG CACGCGCCGC TCGCAGCTGT CGTCGTGCTA CCTGACCACG
GTCTCGGACG ACCTGGAGGG CATCTACGAG GCGCTCAAGG AAAACGCGCT GCTGTCGAAG
TTCGCTGGCG GACTGGGCAA CGACTGGACC AACGTGCGCG CGCTGGGCTC GCACATCAAG
GGCACCAACG GCAAGTCGCA GGGCGTGGTG CCGTTCCTGA AGGTGGTCAA CGACACGGCC
GTGGCCGTGA ACCAGGGCGG CAAGCGCAAG GGCGCGGTCT GCGCGTACCT GGAAACGTGG
CACCTGGACA TCGAGGAATT CCTCGAACTG CGCAAGAACA CCGGCGATGA CCGCCGCCGC
ACGCACGACA TGAACACGGC CAACTGGATT CCGGACCTGT TCATGAAGCG TGTGATGGAA
AATGGCGAAT GGACGCTGTT CTCGCCGGCC AGCTGCCCGG ACCTGCATGA CAAGGTCGGC
AAGGCATTCG AGCAGGCCTA CCTGGGCTAC GAAGCCAAGG CCGCCAACGG CGAACTGAAG
CTGTTCAAGA AAGTGCCGGC CATGCAGCTG TGGCGCAAGA TGCTGGGCAT GCTGTTCGAA
ACCGGCCATC CGTGGATCAC GTTCAAGGAC CCGTGCAACA TCCGCAGCCC GCAGCAGCAC
GTGGGTGTGG TGCATAGCTC GAACCTGTGC ACGGAAATCA CGCTGAACAC GAACGAGAGC
GAAATCGCCG TGTGCAACCT GGGTTCCGTG AACCTGGTGG CCCACCTGAT GCAACAGGCC
GATGGCACGT ACGTGCTGGA TCACGCCAAG CTGCAGAAGA CGATCCGCAC CGCGATGCGC
ATGCTCGACA ACGTGATCGA CATCAACTAC TACGCGGTGG AGAAGGCGCG CAACTCGAAC
CTGCGCCACC GTCCGGTGGG CATGGGCATC ATGGGCTTCC AGGACTGCCT GCACGTGCTG
CGCACGCCGT ACGCCAGCGA CGCCGCGGTG AAGTTCGCCG ATACGTCGAT GGAAGCCGTG
TGCTACTACG CCTACCAGGC GTCGACCGAG CTGGCCGAAG AGCGTGGCCG TTACAGCACC
TACGAGGGTT CGCTGTGGGA TCGTGGCATC CTGCCGCAGG ATTCGCTGAA GCTGCTGGCC
GAAGAACGTG GCGGCTACCT GGACGTCGAC CTGTCGTCGA CGATGGACTG GGACAGCCTG
CGCGGTCGCA TCAAGCAGCA CGGCATGCGC AACTCGAACT GCATCGCGAT CGCCCCGACC
GCGACCATTT CGAACATCAT CGGCGTGTCC GCCTGCATCG AGCCGACGTT CCAGAACCTG
TACGTGAAGT CGAACCTCTC GGGCGAGTTC ACGGTAGTGA ACGACTACCT CGTGCGCGAC
CTGAAGGAAC GCGGCCTGTG GGATGAAGTG ATGGTCGCCG ACCTGAAGTA CTTCGACGGC
TCGCTGGCCC GCATCGACCG CATTCCGCAG GACCTGCGGG ACATTTACGC CACGGCGTTC
GAAGTGGAAC CGACCTGGCT CGTGGAAGCC GCCAGCCGCC GTCAGAAGTG GATCGACCAG
GCCCAATCGC TGAACATCTA CATGGCCGGC GCTTCGGGCA AGAAGCTGGA CGACACCTAC
AAGCTGGCCT GGCTGCGTGG TCTGAAGACC ACGTACTACC TGCGCACGAT GGCTGCCACG
CACGTGGAGA AGTCCACCGT GCAGCGCGGT TCGCTGAACG CGGTGTCGTC GGGCGCCGAC
GGCCAGTCGG GCATCGATGC TGCCGCGTCG GCTGCACCGG CGATGCCGGA GGCCGAGGGC
GCGGTCTGCA CGATGCGTCC GGGCGATCCT GGCTTCGAAG AGTGCGAAGC CTGCCAGTAA
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| Protein sequence | MQTAQNEQQT TGVTGVAGAA AGIAQQSPVA AGVTYQDYKL IRRNGAVVSF EPNKIAVAMT
KAFLAVNGGQ GAGSARVREI VEQLTQNVVR ALVRSRPNGG TFHIEDVQDH VELALMRSGE
HEVARAYVLY REKRTQERAQ ANAQAVARVQ EAGVSFNVTD NGVTYQLDLV ALHALIDNAC
SGLGKAVSAE PILKETLKNL YDGVPMTQVY DSAILAARTL IEKDPAYSQV TARILLHTIR
KEILGAEVTQ TEMATKYAEY FPKFIARGIE AELLDEKLAT YDLARLGAAL DASRDFQFNY
LGLQTLYDRY FLHVDEVRIE MPQAFFMRVA MGLALEEKDR EARAIEFYQL LSSFDFMSST
PTLFNSGTRR SQLSSCYLTT VSDDLEGIYE ALKENALLSK FAGGLGNDWT NVRALGSHIK
GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLETW HLDIEEFLEL RKNTGDDRRR
THDMNTANWI PDLFMKRVME NGEWTLFSPA SCPDLHDKVG KAFEQAYLGY EAKAANGELK
LFKKVPAMQL WRKMLGMLFE TGHPWITFKD PCNIRSPQQH VGVVHSSNLC TEITLNTNES
EIAVCNLGSV NLVAHLMQQA DGTYVLDHAK LQKTIRTAMR MLDNVIDINY YAVEKARNSN
LRHRPVGMGI MGFQDCLHVL RTPYASDAAV KFADTSMEAV CYYAYQASTE LAEERGRYST
YEGSLWDRGI LPQDSLKLLA EERGGYLDVD LSSTMDWDSL RGRIKQHGMR NSNCIAIAPT
ATISNIIGVS ACIEPTFQNL YVKSNLSGEF TVVNDYLVRD LKERGLWDEV MVADLKYFDG
SLARIDRIPQ DLRDIYATAF EVEPTWLVEA ASRRQKWIDQ AQSLNIYMAG ASGKKLDDTY
KLAWLRGLKT TYYLRTMAAT HVEKSTVQRG SLNAVSSGAD GQSGIDAAAS AAPAMPEAEG
AVCTMRPGDP GFEECEACQ
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