| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3077 |
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| Symbol | |
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| ID | 4039905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3332074 |
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| End bp | 3334335 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637978476 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_585218 |
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| Protein GI | 94312008 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGGA CAATGACTCG CCGCACGCCC CTGGCCACCG CCCTCGTAGC CCTTTTTGCC
GTTCCTGCCG CCCCTGCCGC CCTGGCCCAG CAAGCGCCCG CCACGCCCGC TCCTGCGCCG
GCCAGCGCGT CGGAAACCGC GCCTGCAACG CTGCGCGAGA TCACGGTCCA GGGCTCGGCC
ATTCGCGACG ATTTCAGCCC GGCAGGCAGC CAGCTCTCGA AGCTGCCTGC TGAATTGCGT
GACGTCCCCC AGTCCGTGAC GATCGTGAAT CGCGCGGTAA TGGATTCGCA AGGTGCCACC
TCGCTGGCCG ATGCACTGCG CAACGTGCCC GGCATCACGA TCGGCGGCGC CGAGGGCGGC
CAGATCGGTA CCAACATCAA CCTGAACGGG TTCTCGGCGC GTACCGACAT GTACCTCGAC
GGCTTCCGCG ACCGTGGCCA GTACTACCGC GACACATTCG CGCTGGATCA GGTCGAAGTC
ATCATGGGCC CGTCGTCGAT GCTGTTCGGC CGTGGCTCCA CCGGCGGCGT GGTGAACCAG
GTCACCAAGA AGCCGCAGAT GAAAGCCGCC ACGGAGGTAA CCGGCTCCGT CACCACGAAC
GGCCTGGTGC GCGCCACCGC CGACGTGAAC ACGCCAACCG GCGATACCTC CGCCTTCCGC
ATCTCCGCGA TGGCGCAGGA CGGCAAGCCG AGCACGCGCG ACGAAATGAC GGTGCAGGAC
TTCGGCATCG CGCCGTCCTG GCGCTTTGGC ATCGGCACGT CCACCGAGAT CACGCTGTCC
GCCCTGCTCC AGCACAACGA GGACATGCCC GACTATGGTT TCCCGGCCAT CAACGGTCAC
CCGGTCAACG TCAATCGCAA CACGTACTAC GGCTTCAACA ACGACCGCAC GCGCCAGGAC
ATCGCCTCAC TTTCGGCCGG CGTCACGCAC AAGTTCTCGC CGAACCTGCG CTTGCGCAAC
CAGACCTCAT TCAACTACGT ATCCACCGAT GCGCGAGAGA CGGCGCCCAA TGCCGTGGGC
TCGATCGATG CCTCCGGCAA GTTCACGGCG CTGACCACGA CCAATCTGCC ACTGTCGCAG
CTCTATGTGC GCCAACAGAG CCATGACCGC AACATCCGCG ATTACTCGAT CTTCAACCAG
ACCGAACTGA CCGCTGACTT CAACACCGGT CCGGTCAAGC ACACGCTGCT GACGGGCCTG
GAGCTTGGTC ATGATGGTTA CAACAACCAG AACTACTACC GGAACGGCAG CTGCGGCAGC
ACGCCGCTAA ATGCGAACGG GGCCACCACG GGCTACGTCG CCTGCACGCC AGTGGTCGAT
CCGGTCTACC AGGACTCACC GTCGAACGTC GCCTCGAGCG TCGGCAACCT GCAAGGCGGG
TCAGCCAACA CGGTCGCCGT CTACGCCAAC GATTCGATCG AGTTCAGCAA GCAGTGGAAG
GCTGTTGCCG GCCTGCGCTA CGACCGATAT ATCGCCAGCA TCAGCAACTC GATCAACTCC
TCCAACACCA GCGGCAGCAC CGTGCTGCCG TATGCCAACC AGACCGTCAA CTTCACGAGC
GTGCGTCTGG GCGGCATCTG GCAGCCGACG GAGCAGCAGT CGTACTACGT GTCGTATGGC
ACGTCGTTCA ACCCGTCGCT CGAGCAACTG GTCGGCACGG TGGGCCAGCA ATCGCTGGAC
CCGGAGAAGA ACAAATCGTA CGAACTGGGT GGCAAGTGGG ATCTGCGCAA TGGCGACCTT
CAAGTCAACT CGGCGATTTT CCGCATCACC AAGGACAACG CGCGTAGCCA GATCGACGCC
ACCACTTACG CGCTGACGGG CAAGATCCAG GTAGACGGCT TCCGCCTGGG CATGACCGGC
CGCATTACCC AGAAGTGGCA GGTGTTCGCC GGCTACACAT ACCTCGATGG CGTGATCGAG
AACGGCGTCG CCGCCGGCAC GCAAGGCAAG GTGCCGCTCA ATACGCCCAA GCACACGGCC
ACAGCCTGGA CCAGCTACGC GATCCTGCCG AACTGGGAAA TCGGCGGCGG GGCGTTTTAT
ATGTCGCAGC GCTATGCCAA CAACACCAAC ACCGTACAGG TGGGCGGCTA CGTGCGCTGG
GACGGCATGA TCGCCTACCA TCAGCCGAAG TACGATGTGC GCCTGAATCT GTTCAACATC
TTCGACAAGA AGTATTACGA TGCACTGATT CAGTCCGACG GCGGGCGTTC GGTGCCGGGT
ACGGGCCGCA CCGCGATGCT GTCGTTCACA TACCGCATGT AA
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| Protein sequence | MDWTMTRRTP LATALVALFA VPAAPAALAQ QAPATPAPAP ASASETAPAT LREITVQGSA
IRDDFSPAGS QLSKLPAELR DVPQSVTIVN RAVMDSQGAT SLADALRNVP GITIGGAEGG
QIGTNINLNG FSARTDMYLD GFRDRGQYYR DTFALDQVEV IMGPSSMLFG RGSTGGVVNQ
VTKKPQMKAA TEVTGSVTTN GLVRATADVN TPTGDTSAFR ISAMAQDGKP STRDEMTVQD
FGIAPSWRFG IGTSTEITLS ALLQHNEDMP DYGFPAINGH PVNVNRNTYY GFNNDRTRQD
IASLSAGVTH KFSPNLRLRN QTSFNYVSTD ARETAPNAVG SIDASGKFTA LTTTNLPLSQ
LYVRQQSHDR NIRDYSIFNQ TELTADFNTG PVKHTLLTGL ELGHDGYNNQ NYYRNGSCGS
TPLNANGATT GYVACTPVVD PVYQDSPSNV ASSVGNLQGG SANTVAVYAN DSIEFSKQWK
AVAGLRYDRY IASISNSINS SNTSGSTVLP YANQTVNFTS VRLGGIWQPT EQQSYYVSYG
TSFNPSLEQL VGTVGQQSLD PEKNKSYELG GKWDLRNGDL QVNSAIFRIT KDNARSQIDA
TTYALTGKIQ VDGFRLGMTG RITQKWQVFA GYTYLDGVIE NGVAAGTQGK VPLNTPKHTA
TAWTSYAILP NWEIGGGAFY MSQRYANNTN TVQVGGYVRW DGMIAYHQPK YDVRLNLFNI
FDKKYYDALI QSDGGRSVPG TGRTAMLSFT YRM
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