Gene Rmet_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3065 
Symbol 
ID4039893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3321439 
End bp3322806 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID637978464 
Productacetyl-CoA carboxylase biotin carboxylase subunit 
Protein accessionYP_585206 
Protein GI161621299 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATA AAATTCTGAT CGCGAACCGC GGTGAAATCG CCCTTCGCAT CCAGCGCGCC 
TGCCGCGAGC TGGGCATCAA GACCGTGGTG GTGTACTCGG AAGCCGACAA GGACGCCAAG
TACGTCAAGC TGGCCGATGA AGCCGTCTGT ATCGGCCCGG CCCCGTCGCC GCTGTCATAC
CTGAACATGC CGGCCATCAT CTCGGCCGCC GAAGTGACCG ACGCCCAGGC GATCCACCCG
GGCTATGGCT TCCTGTCCGA GAACGCGGAC TTCGCCGAGC GCGTGGAGAA ATCCGGCTTC
GTGTTCATCG GCCCGACCTC CGAAAACATC CGCCTGATGG GTGACAAGGT GTCGGCCAAG
CAGGCCATGA TCAAGTCCGG CGTGCCGTGC GTGCCCGGCT CCGATGGCGC ACTGCCCGAC
GACCCGAAGG AAATCCTGGC AACGGCCCGT CGCGTGGGCT ACCCCGTGAT CATCAAGGCC
GCTGGCGGCG GCGGTGGCCG CGGCATGCGC GTGGTGCACA CCGAAGCCGC CCTGCTCAAC
GCCGTCAACA TGACGCGCGA GGAAGCCGGC CGCGCCTTCG GCAATCCCGA GGTCTACATG
GAGAAGTTCC TCGAGAACCC GCGCCATGTG GAAATCCAGA TCCTGGCCGA CCAGCATCGG
CAGGCCATCT GGCTGGGCGA ACGCGACTGC TCGATGCAGC GCCGCCACCA GAAGGTGATC
GAGGAAGCGC CGGCACCGCA CATTCCGCGC CGCCTGATCG AGCGCATCGG CGACCGTTGC
GCCGAGGCCT GCAAGAAGAT CGGCTACCGT GGCGCCGGCA CGTTCGAGTT CCTGTACGAG
AACAACGAGT TCTACTTCAT CGAGATGAAC ACGCGTGTGC AGGTCGAGCA CCCGGTCACC
GAGATGATCA CGGGCATCGA CATCGTGCAG GAGCAGATCC GCATCGCCTT CGGCGAGAAG
CTGCGCCTCC GCCAGAAGGA CGTGGAACTG CGCGGCCACG CGATCGAGTG CCGGATCAAC
GCCGAGGACC CGTTCAAGTT CACGCCGTCG CCGGGCCGCA TCACCGCCTG GCACATGCCC
GGTGGCCCCG GCGTGCGCGT AGACTCCCAT GCGTACGACG GCTACTTCGT GCCGCCCAAC
TACGATTCGA TGATCGGCAA GATCATCACG TATGGCGCGA CGCGTGACCA GGCCATCGCC
CGCATGCGCA TCGCGCTGTC GGAAATGGTG GTGGACGGCA TCCTGACCAA CGTGCCGCTG
CACCGCGACC TGATGCTCGA CGCCAACTTC GTGGAAGGCG GCACCAGCAT TCACTATCTC
GAACACCGTC TGGCCCAAAA GGCCAACGTC CAGGGCGAAA AGGCCTGA
 
Protein sequence
MFDKILIANR GEIALRIQRA CRELGIKTVV VYSEADKDAK YVKLADEAVC IGPAPSPLSY 
LNMPAIISAA EVTDAQAIHP GYGFLSENAD FAERVEKSGF VFIGPTSENI RLMGDKVSAK
QAMIKSGVPC VPGSDGALPD DPKEILATAR RVGYPVIIKA AGGGGGRGMR VVHTEAALLN
AVNMTREEAG RAFGNPEVYM EKFLENPRHV EIQILADQHR QAIWLGERDC SMQRRHQKVI
EEAPAPHIPR RLIERIGDRC AEACKKIGYR GAGTFEFLYE NNEFYFIEMN TRVQVEHPVT
EMITGIDIVQ EQIRIAFGEK LRLRQKDVEL RGHAIECRIN AEDPFKFTPS PGRITAWHMP
GGPGVRVDSH AYDGYFVPPN YDSMIGKIIT YGATRDQAIA RMRIALSEMV VDGILTNVPL
HRDLMLDANF VEGGTSIHYL EHRLAQKANV QGEKA