Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3063 |
Symbol | |
ID | 4039891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3320115 |
End bp | 3320603 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637978462 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_585204 |
Protein GI | 94311994 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTCTA CTCCTGCCGT CAGCCGCCCC GTCCGTTACC GCAAGGTGCT GGTTCTGCAT GGTCCGAACC TCAATTTGCT CGGGACGCGC GAGCCGCAGA CGTACGGACA CACGACGCTG GACGATATCA ACGAAGCGCT GGCCAAGCGC GCGGCCGAAG CGGGCATCGA GTTGGATACG TTCCAGTCGA ATCACGAGGG AGCCCTCGTG GACCGCATTC AGGCAGCGCG TGGCGAGGGG GTGGACTTCA TCATCATCAA TCCGGCGGCC TATACCCATA CGAGTGTGGC CATGCGCGAT GCGCTCGCTG GCGTGGCCAT TCCCTTCGTC GAGGTGCATC TGTCCAATGT GCATCGCCGC GAGCCGTTCC GTCATCACTC CTATTTCTCT GATCAGGCGA TCGGGGTGAT ATGCGGCCTG GGCTGGCAGG GTTATCTGCT GGCGCTGGAT TACGCGCTTG CACAGGAACA GACCGCATCA TCTGGCTAA
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Protein sequence | MSSTPAVSRP VRYRKVLVLH GPNLNLLGTR EPQTYGHTTL DDINEALAKR AAEAGIELDT FQSNHEGALV DRIQAARGEG VDFIIINPAA YTHTSVAMRD ALAGVAIPFV EVHLSNVHRR EPFRHHSYFS DQAIGVICGL GWQGYLLALD YALAQEQTAS SG
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