| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3056 |
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| Symbol | |
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| ID | 4039884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3312781 |
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| End bp | 3314919 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978455 |
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| Product | ribonuclease II |
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| Protein accession | YP_585197 |
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| Protein GI | 94311987 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.235713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGC TGTTCGAAGA AGGCGGCGAA ATCCGCGCCG GCACCGTGCT CGCCCAGCAG
GGCGAGGCCT ACCAGGTCGA GTTGCCTGCG GGCAAGCGCA CCAAGGTCAA GGCCAAGGAT
GTGCTGCTGC AGTTCGCCCA ACCGTCGGCA ATGGAGATGG TGCGGCAGAC CGGCGAAATG
ACCGCCGAGA TCGATCTCGA CTTCCTCTGG GAATGCGCGC CGGCCGAGGA ATTCGGCTTT
GCCGAACTGG CCGCCGAATA CTATGGCGCC GACGCGGGCC CGGTGCAGCA GGCCGCGCTG
GCGATGGCGC TGCATGGCAA TCCGATCTAT TTCCGCCGCA AGGGACGGGG CCGCTACATG
CGCGCGCCGG AAGACCAGCT CAAGGCCGCG CTGGCCGCGG TGGAGCGCAA GAAGCAGCAG
GCGCTGGTGC AGGGCGAGTA CGAGGAGCAA CTCAAGGCGC TGACTCTGCC CGAAGCGTTC
CGCGGCAAGG CGCTGCAACT GCTGTTCAAG CCTGACAAGA ACAGTCTCGA ATACAAGGCC
ATGGATGCCG CCTGCACCGC GCTCGGCATG ACGCCGATGC GGCTGATGGT GGCTGTTGGC
GGCGTGGAAA GCCCGCGCGC GCTGCACGAG GCCAAGTTCC TGGCCGATTG TTTCCCGAAG
GGCACCGGTT TCCCGGACGT CGATGTGCCG GAGCCGCCCG CCGACCTGCC CGTGGCCGAT
GTGCAGGCGT TCTCGATCGA CGACGTTACG ACGACCGAGA TCGACGATGC GCTGTCCGTG
ACGCGTCTGG GCGACGGCAA GCTGCGCGTG GGGATCCATA TCGCTGCGCC GGGGCTCGGC
ATCCGCCGCA GCGAGCCGCT CGACGCCATC GCGCGCCATC GACTGTCCAC GGTCTACTTC
CCCGGCGACA AGATCACGAT GCTGCCCGAC AGCGTAGTGG ACCGCTACAC GCTGCAGGAA
GGCCGCACCT GCCCGGCGCT GTCGCTTTAC GTGACGATCG ACCCGAACGG CGTGGATGGC
CTGACAATCG TCGGCAGCGA GACGCGCGCC GAGCAGGTGC CGATTGCCGC GAACCTGCGG
CACAACCTGC TCGACGACAT CGTGACGGAA GCCGCGCTGG CCGCGGGCAC GGGCGACTAT
CCGTTCCGCG ATGAACTGAC CGAGCTGTAC CGGCTGGCCA ACCACCTGCA CGACGAGCGT
CAGCGCGCGC GTCTTGCCAG CGGCCTGCGC CCGGAGGCGC ACAACCGCGC CGATTTCAAT
TTCTACATCG ATCAGATCGA GGGTGGCGGC GAGCGCGTGC GTATCGAGCA GCGCCGCCGT
GGCTCGCCGC TGGACCAGAT CGTGGCCGAG TTGATGATTC TGGCCAACAG CACGTGGGGC
AAGTTGCTGG CGGACCACGG CGTGCCGGGT ATCTACCGCA CGCAGAAGGC GTGGGGGATG
CACCGCACGC GGATGCAGAC GTACCCCGCG CCGCACGAGG GCCTGGGCGT CGCGCAGTAT
GCGTGGAGTA CGTCGCCGCT GCGCCGCTAC GTCGACCTGG TCAATCAATG GCAGATCATG
GCCGTGGCCC AGCATGGCGT GACCGCCAAG CTCGTTGCGC CGTTCAAGCC CAAGGACGCC
GACCTGCTGG CGGCCGTGGC CGACTTCGAA GGGACCTATG CGGCCTACGC CGACCACCAG
TCGACCATGG AGCGTTACTG GTGCCTGCGC TGGCTCAAGC AGGAGAATCG TGACCGGATG
ATGGCCACGG TGCTCAAGGA TGGCGCGGTG CGCTTTACCG ACATCCCGCT GGTCACCCGT
GTGCCGGAGT TGATGCAGGC GGTGCGTGGC ACGCAGGTGC TGCTGGAGAT CGCCACGACG
GACGAGATCT CGCTCGAGGT GTCGTGCAGG GTGCTGGAAG TCTTTGCTGG CGAGGGCGCG
ATGCCCGATG AGGATCTCGA CGCCGACGAG GAACTGGACG AGGCTTCCGC GGAAGCGGCC
GCCGATGCCG CCGCCGAGGC AGCGGCTGAA GACGCCGTGG AAGGCGCGGC GGAAGGGGCC
GATGCTGCGC CGGAGGACGC CGATTCCGAG GCTTCCGAGG GCGATCAGGA CGACGAGGCG
TCTGCGCCAC GCGACACTGG CGCCAATCCG GCTGCCTGA
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| Protein sequence | MQLLFEEGGE IRAGTVLAQQ GEAYQVELPA GKRTKVKAKD VLLQFAQPSA MEMVRQTGEM
TAEIDLDFLW ECAPAEEFGF AELAAEYYGA DAGPVQQAAL AMALHGNPIY FRRKGRGRYM
RAPEDQLKAA LAAVERKKQQ ALVQGEYEEQ LKALTLPEAF RGKALQLLFK PDKNSLEYKA
MDAACTALGM TPMRLMVAVG GVESPRALHE AKFLADCFPK GTGFPDVDVP EPPADLPVAD
VQAFSIDDVT TTEIDDALSV TRLGDGKLRV GIHIAAPGLG IRRSEPLDAI ARHRLSTVYF
PGDKITMLPD SVVDRYTLQE GRTCPALSLY VTIDPNGVDG LTIVGSETRA EQVPIAANLR
HNLLDDIVTE AALAAGTGDY PFRDELTELY RLANHLHDER QRARLASGLR PEAHNRADFN
FYIDQIEGGG ERVRIEQRRR GSPLDQIVAE LMILANSTWG KLLADHGVPG IYRTQKAWGM
HRTRMQTYPA PHEGLGVAQY AWSTSPLRRY VDLVNQWQIM AVAQHGVTAK LVAPFKPKDA
DLLAAVADFE GTYAAYADHQ STMERYWCLR WLKQENRDRM MATVLKDGAV RFTDIPLVTR
VPELMQAVRG TQVLLEIATT DEISLEVSCR VLEVFAGEGA MPDEDLDADE ELDEASAEAA
ADAAAEAAAE DAVEGAAEGA DAAPEDADSE ASEGDQDDEA SAPRDTGANP AA
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