Gene Rmet_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3053 
SymbolmtgA 
ID4039881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3310025 
End bp3310726 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID637978452 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_585194 
Protein GI94311984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTGGC TGGCCTATCT GGCCGGCTGC CTGATCGTTG GCGTGGTGGC GATGCAGGTC 
TATTTCTTCC TGCAGATCGC TGCCTGGCAG GTCGTCAATC CGTCGTCCAC CACGTTCATG
CGTGCCGAGC GCTGGCGGCT GTGCGGCTTC AATTTCTGGA GCTGCCCGGT GCAGCGGCAA
TGGGTGCGCT ACGACGAAAT CTCGCGCAAC ATCAAGCGCG CCGTGATCGC CAGCGAGGAT
GCCGACTTCG TCAATCATCC CGGCTACGAA CTTGATGCGA TGCTCGATGC CTGGGAACGC
AACAAGCAGC GTGGACGCAT CGTGCGCGGC GGTTCCACCA TCACGCAGCA ACTGGCCAAG
AACCTGTTCC TGTCTTCGGA GCAGAACTAC CTGCGCAAGG GCCAGGAACT GGCGATCACG
TGGATGCTGG AGCTCTGGCT CGACAAGCAG CGGATCTTCG AGATTTACCT GAATTCGGTG
GAGTGGGGCG AAGGCGTGTT CGGCGTCGAG GCTGCCGCGC AGCACTACTT CCATACCTCG
GCTTCGAAGC TCAGCGTGGG GCAGGCCGCC CGGCTCGCGG CCGCGCTACC GGCGCCCAAG
TGCTTCGACA AGAAGCAGTA CTGCGCCAAC GTGCACGTGA ACTTCCGCGT CAAGGCGTCG
ATCATCGCCA GGCGGATGGG CGCGGCAACG TTGCCGGACT AG
 
Protein sequence
MRWLAYLAGC LIVGVVAMQV YFFLQIAAWQ VVNPSSTTFM RAERWRLCGF NFWSCPVQRQ 
WVRYDEISRN IKRAVIASED ADFVNHPGYE LDAMLDAWER NKQRGRIVRG GSTITQQLAK
NLFLSSEQNY LRKGQELAIT WMLELWLDKQ RIFEIYLNSV EWGEGVFGVE AAAQHYFHTS
ASKLSVGQAA RLAAALPAPK CFDKKQYCAN VHVNFRVKAS IIARRMGAAT LPD