| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3048 |
|---|
| Symbol | |
|---|
| ID | 4039876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3305375 |
|---|
| End bp | 3305947 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978447 |
|---|
| Product | phosphatidylglycerophosphatase |
|---|
| Protein accession | YP_585189 |
|---|
| Protein GI | 94311979 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCT ATCCCCCGGG GGCCGCGCCT AGCGACCCCG TTGACCCCGT CACGCTGGAA
GCCGGCCAGA CCGCCAAGGT CACGCGGCCA ACCGGCCGGT TCATGCTGGG CCACCCGGCC
CGTCTGATTG CGCTTGGATT CGGCTCTGGC CTGTCGCCGG TCAGCCCCGG CACCGTCGGC
ACGCTGCTCG GCTGGCTGTC GTTCATCGTG ATTTCGAAGT GGATCGATCC GACCACTTGG
CTGTGGATCA TCGCCGGCGG CTTCGTGATC GGCATCTGGG CTTGCCTGCG TACGGCACGC
GACATGGGCG TGTACGACCA CGGCAGCATG GTCTGGGACG AGATCGTGGC GTTCTGGCTG
GTGCTGCTGT TCGTGATGCC AACGGGCTTC TGGGGCCAGT TCGCCGCGTT CGTGTGGTTC
CGGTTCTTCG ACATCGTCAA GCCGGCACCG ATCCGCTACT ACGATCGCAC GCTCAAGGGC
CCGGGCTTTA CCGGCGCCTT CGGCGTAATG TTCGATGACA TCTTCGCGGC GTTCTACACG
CTGCTCGTGT TCGCCTTGTG GCGTTCGATC TGA
|
|---|
| Protein sequence | MSAYPPGAAP SDPVDPVTLE AGQTAKVTRP TGRFMLGHPA RLIALGFGSG LSPVSPGTVG
TLLGWLSFIV ISKWIDPTTW LWIIAGGFVI GIWACLRTAR DMGVYDHGSM VWDEIVAFWL
VLLFVMPTGF WGQFAAFVWF RFFDIVKPAP IRYYDRTLKG PGFTGAFGVM FDDIFAAFYT
LLVFALWRSI
|
|---|
| |