Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3024 |
Symbol | |
ID | 4039852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3281707 |
End bp | 3282564 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637978424 |
Product | putative replication initiator and transcription repressor protein |
Protein accession | YP_585166 |
Protein GI | 94311956 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5534] Plasmid replication initiator protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.206495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC CCGCGCTGCC CATGCGGCAG CGACCGATGC AAGAGCGCGA ACAGCTCGAT CTGTTCCGCG CCTTGCCGGG CGACATGGCG CCGCGCGACA GCCAGGACTT GATGGCCTTT CCGTTCTTCT CGCTGGCGAA GTCGCGGCGC ACGGCGCCGA TCGACTTCCG CGCCAGCGGC ATCACGATCC GCGTGGAGGG CACGCAGGAG CATGGCATCG CCACGATTTG GGATGCGGAC ATCCTGATCT GGGCTGCAAG CCAGATTGTG GAAGCCCGCG ATGCGGGCTT GCGCCCGTCG CGGCTGATGC AGGCCACGCC CTACGAGATC CTGCGCTTCA TCGGGCGCGG TACGTCGCTG CGCGACTACC AGCGCCTCAA GGCGGCCTTG GATCGGCTGC AGTCCACGAC CGTGGCCACG TCGATCCGCG AGACGACCGG GCGGCGCCTG CATCGCTTCT CATGGATCAA CGAGTGGAAG GAACTGGCCG ATGCCAAGGG CACCCCCTTG GGGCTGGAAC TGATCCTGCC GGACTGGTTC TATGCGGGCG TGCTCGATGC TGCCCTCGTG TTGACCATCG ACCCGGCGTA TTTCCGGCTG ACGGGCGGGA TCGAGCGATG GCTGTACCGC CTGGTGCGCA AGCACGGCGG GCGACAGCCT GGCGGCTGGC AGTTCGACTT CCAGCACCTG TACCGCAAGT CGGGCAGCGT GGCGCGGTAC TACGACTTCG CCGCCGACCT GCGCGCACTG GTGGTGCGGC AAGCCTTGCC TGGCTACCAG TTGGGCATCG AGTACGTCTC GGGCATTGCC TCGCCGCTGC TGACGTTCCG GCCCGTGCCG TCCACGGCAC GGGGATAA
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Protein sequence | MSSPALPMRQ RPMQEREQLD LFRALPGDMA PRDSQDLMAF PFFSLAKSRR TAPIDFRASG ITIRVEGTQE HGIATIWDAD ILIWAASQIV EARDAGLRPS RLMQATPYEI LRFIGRGTSL RDYQRLKAAL DRLQSTTVAT SIRETTGRRL HRFSWINEWK ELADAKGTPL GLELILPDWF YAGVLDAALV LTIDPAYFRL TGGIERWLYR LVRKHGGRQP GGWQFDFQHL YRKSGSVARY YDFAADLRAL VVRQALPGYQ LGIEYVSGIA SPLLTFRPVP STARG
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