| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3018 |
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| Symbol | |
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| ID | 4039846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3277026 |
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| End bp | 3279002 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637978418 |
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| Product | hypothetical protein |
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| Protein accession | YP_585160 |
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| Protein GI | 94311950 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0413354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC GCCGCGACGA TGATTTCCGC ATCCGCCCCA GCGCACCGAA GAACCGGGGC
CAGGGCTTCG TATCCAAGGT GCTCCAGCAG GCAGGCAAGG CCAGCGGCGG CAAGTCCACG
GTGCGCCGTC CTGGCGGCAG TGGCAAGGGC ACCGGCCAGC GGCCCGGATC GCGCCTGGGA
CGCGGCCACA CGGCGGCGCG CTTCGCAGGG GCGAAGCTCA CGCCTATGTC GCGGCGCGTG
ACCATCAAGA CACTACTGGT CAACCAGCAG CGGGCCAGTC CGCAGTCGCT CGCCAAGCAC
CTGCGCTACA TCGAGCGCGA CGGCGTGGGC CGCGACGGCG AACCGGGTCG GGCCTATGGG
CCGCAGACCG ACGAAGCTGA TCTGAACGCA TTCAAGGAGC GCTGCGCCGA TGATCGGCAC
CACTTTCGCT TCATCGTTTC GCCCGAGGAA GGGGCCGAGC TGGAAGACCT GCGCACCTAC
ACGCGGCACC TGATGGGACG CATGGAGGCC GACCTGGGCA CGCGGCTGGA ATGGGTGGCG
GTCGATCACT GGAATACCGA CAACCCGCAC ACCCACCTGA TCGTGCGCGG GCGCGACGAC
ACCGGCAAAG ACCTCATCAT CGCGGGCGAC TACATCACTG ATGGTTTTCG TCATCGCGCC
GCCGAGCTGG CGACCGAATG GCTGGGGCCA CGCACCGAGC TGGAGATCCA GCAGACCTTG
CAGCGCGAGG TGGAGCAAGA GCGGTGGACT AGCCTGGATC GCACGTTGAA ACGCGAGGCC
GGCGAGGATG GCCGGGTACA GATCGAACGC TTCAACGAAC CGACGTTGCA ACGCCAGCGC
CTGCTGCTGA TCAGCCGCCT GCAACGCTTG CAGCACCTGG GCCTGGTCGA CGAGACGCAG
CCCGGCAGTT GGGCCGTCCA TGCCGATGCC GAGAAGACCT TGCGCGCCCT GGGCGAGCGT
GGAGACATCA TCCGCACCAT CCAGCGGGCC ATGAGCGGCC AGCCGCGCGA GCTGGCGGTG
TTCGAGCCGG GCGACGATGG CCGAACTATT CTCGGCCGCG TAGCCGCGAA GGGGCTGGCC
GACGAACTGC GCGACCGGGG CTATCTGGTC ATCGACGGCG TGGACGGCAA GGCCCACTAC
GTCGCGCTCA ATGCCCGCGA CGAGCTGGCG AACTATCCCA GCGGCGCCGT GGTGGAGGTG
AAAGGATCGG CCGACGTGCG CGCGGCGGAC AAGAACATCG CCGCGCTGGC GAGCGATGGC
TTGTACCGTA CCGACCATCA CCTCGCCATC GCCCAGGGGC AGGCCGTGCC CGGCCGCGAT
CCGCAGGAAG TCGTCGCGGC CCATGTCCGC CGACTGGAAG CCTTGCGCCG CGCCGGCATC
GTGGAGCGTG TGGCCGAAGG TCTATGGAAG GTGCCGGACG ATCTGCCCGA GCGTGGCCGT
CAGTACGACG CGCAGCGCCT GGGAAGCGTG GCCGTGGAAC TGAAATCGCA CCTGCCCATC
GAGCGGCAGG CCCGCGTGAT CGGGGCCACC TGGCTCGACC AGCAACTGAT CGGCGGCGGC
TCGGGCCTGG GCGACCTGGG CTTTGGCGGC GAGGCCAAAC AGGCCATGCA GCAGCGCACC
GACTTCCTGG CCGAACAGGG GTTGGCCGAG CGGCGCGGGC AGCGCGTGAT CCTGGCGCGC
AACCTGCTGG GCACGCTGCG CAACCGGGAG CTGGCGCAGG CCGCGAAGGA CATTGCAGGC
GAAACGGGCC TGGAGCATCG GCCCGTGGCC GACGGGCAGC GCGTGGCCGG CATCTACCGG
CGCAGCGTCA TGCTCGCCAG CGGGCGCTAC GCGATGCTTG ATGACGGCAT GGGCTTCTCG
CTGGTGCCGT GGAAGCCGGT GATCGAACAG CGATTGGGGC AGCAGCTTTC CGCGACGGTT
CGCGGCGGCG GGGCGTCCTG GGAGATTGGG CGGCATCGGG GGCCAACCAT TTCTTGA
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| Protein sequence | MTNRRDDDFR IRPSAPKNRG QGFVSKVLQQ AGKASGGKST VRRPGGSGKG TGQRPGSRLG
RGHTAARFAG AKLTPMSRRV TIKTLLVNQQ RASPQSLAKH LRYIERDGVG RDGEPGRAYG
PQTDEADLNA FKERCADDRH HFRFIVSPEE GAELEDLRTY TRHLMGRMEA DLGTRLEWVA
VDHWNTDNPH THLIVRGRDD TGKDLIIAGD YITDGFRHRA AELATEWLGP RTELEIQQTL
QREVEQERWT SLDRTLKREA GEDGRVQIER FNEPTLQRQR LLLISRLQRL QHLGLVDETQ
PGSWAVHADA EKTLRALGER GDIIRTIQRA MSGQPRELAV FEPGDDGRTI LGRVAAKGLA
DELRDRGYLV IDGVDGKAHY VALNARDELA NYPSGAVVEV KGSADVRAAD KNIAALASDG
LYRTDHHLAI AQGQAVPGRD PQEVVAAHVR RLEALRRAGI VERVAEGLWK VPDDLPERGR
QYDAQRLGSV AVELKSHLPI ERQARVIGAT WLDQQLIGGG SGLGDLGFGG EAKQAMQQRT
DFLAEQGLAE RRGQRVILAR NLLGTLRNRE LAQAAKDIAG ETGLEHRPVA DGQRVAGIYR
RSVMLASGRY AMLDDGMGFS LVPWKPVIEQ RLGQQLSATV RGGGASWEIG RHRGPTIS
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