Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3014 |
Symbol | |
ID | 4039842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3272650 |
End bp | 3273357 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978414 |
Product | hypothetical protein |
Protein accession | YP_585156 |
Protein GI | 94311946 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00253344 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCAAAT TTCACCACCG CGCCCACCCT GAAAGTCACC GCACTGAACA TATCGGATGG CTGCGCGCCG CTGTTCTGGG TGCCAATGAC GGCATCATTT CCACGGCCAG CCTAGTTGCA GGCGTGGCTG CTGCCCATGC AAGCCATGCC AGCATCATGA CCACGGCCAT CGCGGGGTTG GTAGCCGGCG CCATGTCCAT GGCTGCAGGC GAGTTCGTGT CGGTCTATTC ACAAGCTGAT ACGGAAAAGG CAGATCTGGC GCGGGAGCGT GATGAACTGA AGAACAGTCC GGAAGCCGAA CATCGCGAAC TCACGGCCAT CTATGTTCGG CGTGGCTTGG ATCATCGACT CGCGGATCAG GTCGCCACGC AATTGATGGT GCATGATGCG CTAGGCGCGC ACGCGCGCGA TGAATTGGGC ATCTCTGAAA CCTTGAGCGC TCGCCCGCTG CAAGCCGCCA TGGCGTCTGC TGGAAGCTTC GCCGTTGGTG CGGCCATGCC GCTGGCCGTG GTTCTGTTGG CGCCGGAGCA GAGCCTGCTC TATTGGATCG TCGCGACGGC GATTGTCTTC CTGGCCCTGC TCGGCGCTGC GGCTGCTGCC GTGGGTGGTA CGCCGCTCTT CAAAAGTGCG CTGCGCGTCG CGTTCTGGGG CACATTTGCC ATGGCGGTGA CAGCGGGCGT GGGAGCCATG TTCGGCACCG CGGTGTAG
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Protein sequence | MTKFHHRAHP ESHRTEHIGW LRAAVLGAND GIISTASLVA GVAAAHASHA SIMTTAIAGL VAGAMSMAAG EFVSVYSQAD TEKADLARER DELKNSPEAE HRELTAIYVR RGLDHRLADQ VATQLMVHDA LGAHARDELG ISETLSARPL QAAMASAGSF AVGAAMPLAV VLLAPEQSLL YWIVATAIVF LALLGAAAAA VGGTPLFKSA LRVAFWGTFA MAVTAGVGAM FGTAV
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