Gene Rmet_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3014 
Symbol 
ID4039842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3272650 
End bp3273357 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID637978414 
Producthypothetical protein 
Protein accessionYP_585156 
Protein GI94311946 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00253344 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAAAT TTCACCACCG CGCCCACCCT GAAAGTCACC GCACTGAACA TATCGGATGG 
CTGCGCGCCG CTGTTCTGGG TGCCAATGAC GGCATCATTT CCACGGCCAG CCTAGTTGCA
GGCGTGGCTG CTGCCCATGC AAGCCATGCC AGCATCATGA CCACGGCCAT CGCGGGGTTG
GTAGCCGGCG CCATGTCCAT GGCTGCAGGC GAGTTCGTGT CGGTCTATTC ACAAGCTGAT
ACGGAAAAGG CAGATCTGGC GCGGGAGCGT GATGAACTGA AGAACAGTCC GGAAGCCGAA
CATCGCGAAC TCACGGCCAT CTATGTTCGG CGTGGCTTGG ATCATCGACT CGCGGATCAG
GTCGCCACGC AATTGATGGT GCATGATGCG CTAGGCGCGC ACGCGCGCGA TGAATTGGGC
ATCTCTGAAA CCTTGAGCGC TCGCCCGCTG CAAGCCGCCA TGGCGTCTGC TGGAAGCTTC
GCCGTTGGTG CGGCCATGCC GCTGGCCGTG GTTCTGTTGG CGCCGGAGCA GAGCCTGCTC
TATTGGATCG TCGCGACGGC GATTGTCTTC CTGGCCCTGC TCGGCGCTGC GGCTGCTGCC
GTGGGTGGTA CGCCGCTCTT CAAAAGTGCG CTGCGCGTCG CGTTCTGGGG CACATTTGCC
ATGGCGGTGA CAGCGGGCGT GGGAGCCATG TTCGGCACCG CGGTGTAG
 
Protein sequence
MTKFHHRAHP ESHRTEHIGW LRAAVLGAND GIISTASLVA GVAAAHASHA SIMTTAIAGL 
VAGAMSMAAG EFVSVYSQAD TEKADLARER DELKNSPEAE HRELTAIYVR RGLDHRLADQ
VATQLMVHDA LGAHARDELG ISETLSARPL QAAMASAGSF AVGAAMPLAV VLLAPEQSLL
YWIVATAIVF LALLGAAAAA VGGTPLFKSA LRVAFWGTFA MAVTAGVGAM FGTAV