| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3010 |
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| Symbol | |
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| ID | 4039838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3265914 |
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| End bp | 3267443 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978410 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_585152 |
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| Protein GI | 94311942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00333302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGGGGCTGT CCCGGCGGCA GGTCTACGTC CTGATCCGCC GTGCCCGGCT AGGATCGGGG
CTGGTCACTG ACTTGGCTCT TGGGCAGTCG AGCGGTGGCA AAGGTAAAGG CCGCTTGCCG
GAGTCGGTCG AACGAATCAT CCGCGAGTTA CTGCAAAAGC GCTTCCTGAC CAAGCAGAAG
CGTAGCTTGG CGGCGTTCCA CCGCGAAGTT GTGCGGGCGT GCAAGCTGCA AAAGCTGCGG
GTGCCGGCGC GCAACACGGT GGCTCTGCGG ATCGCCGGCC TCGATCCGCG CGAGGTCACT
CACCGCCGGG AAGGACAAGA TGCCGCCCGC GACCTGCAAG GTGTTGGTGG TGTTCCGCCA
CCCGTCTCCG CGCCGCTGGA GCAGGTGCAG ATCGACCACA CAGTCATCGA CCTGATCGTG
GTGGACGAGC GCGACCGGCA ACCGATTGGC CGTCCATACC TGACCCTCGC CATCGACGTA
TTCACCCGCT GCGTGGTTGG CATGGTCGTT ACGCTGGAAG CCCCGTCCGC CGTCTCGGTC
GGCTTGTGCT TGGTGCATGC CGCCTGCGAC AAGCGCCCTT GGTTGGAAGG GTTGAACGTA
GAGATGGATT GGCCGATGAG CGGCAAGCCC AGACTGCTCT ACTTGGACAA CGCGGCTGAG
TTCAAGAGCG AGGCGCTGCG CCGTGGCTGC GAGCAGCATG GCATCCGGTT GGACTATCGC
CCGCTTGGGC AGCCGCACTA CGGCGGTATC GTGGAACGGA TCATCGGCAC GGCGATGCAG
ATGATCCACG ACGAATTGCC GGGGACGACC TTCTCCAATC CTGACCAGCG CGGGGAATAC
GCCTCCGAGA AGATGGCCGC CCTGACACTG CGCGAGCTGG AGCGCTGGCT CACATTGGCG
GTCGGCACCT ATCACGGCTC CGTGCACAAC GGCCTGCTCC AACCGCCGGC CGCGCGCTGG
GCCGAAGCTA TCACGCGGAC CGGCGTGCCA ACCGTCATCA CTCGCGCTAC GGCTTTTCTG
GTCGATTTTC TGCCCATCAT CCGCCGCACG CTGACCCGCA CCGGCTTCGT CATCGACCAC
ATCCACTACT ACGCCGATGC GCTCAAGCCG TGGATAGCTC GGCGGGACCG CTTGCCTGCG
TTCCTGATCC GGCGCGACCC GCGCGACATC AGCCGCATAT GGGTGCTGGA ACCAGAGGGG
CAGCACTACC TGGAAATTCC CTACCGTACC TTGTCGCACC CGGCTGTCAC CCTCTGGGAA
CAACGACAGG CGCTGGCGAA ATTGCGGCAG CAAGGGCGCG AACAGGTGGA TGAGTCGGCG
TTGTTCCGCA TGATCGGCCA GATGCGCGAA ATCGTTACCA CCGCGCAGAA GGCTACGCGC
AAGGCGCGGC GCGACGCGGA TCGACGCCAG CATCTCAAGG CAACGGCAAC GCCTGTCAAA
ACCACGCCAC CACCGGGCGC TGACATGGAT GGGCAGCAGG CAGACAACCA GCCGCCGGCC
AAACCGTTCG ACCAGATTGA GGAGTGGTAG
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| Protein sequence | MGLSRRQVYV LIRRARLGSG LVTDLALGQS SGGKGKGRLP ESVERIIREL LQKRFLTKQK
RSLAAFHREV VRACKLQKLR VPARNTVALR IAGLDPREVT HRREGQDAAR DLQGVGGVPP
PVSAPLEQVQ IDHTVIDLIV VDERDRQPIG RPYLTLAIDV FTRCVVGMVV TLEAPSAVSV
GLCLVHAACD KRPWLEGLNV EMDWPMSGKP RLLYLDNAAE FKSEALRRGC EQHGIRLDYR
PLGQPHYGGI VERIIGTAMQ MIHDELPGTT FSNPDQRGEY ASEKMAALTL RELERWLTLA
VGTYHGSVHN GLLQPPAARW AEAITRTGVP TVITRATAFL VDFLPIIRRT LTRTGFVIDH
IHYYADALKP WIARRDRLPA FLIRRDPRDI SRIWVLEPEG QHYLEIPYRT LSHPAVTLWE
QRQALAKLRQ QGREQVDESA LFRMIGQMRE IVTTAQKATR KARRDADRRQ HLKATATPVK
TTPPPGADMD GQQADNQPPA KPFDQIEEW
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