Gene Rmet_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3003 
Symbol 
ID4039831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3259813 
End bp3260571 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID637978403 
Producthypothetical protein 
Protein accessionYP_585145 
Protein GI94311935 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.318216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT CCACTGAACA CGCGCTGGCC AAGGTGCCCG AAGTCACGCT GGGCTTCTGG 
CTCATCAAGA TTGCCGCCAC GACGCTCGGT GAAACTGGCG GTGATGCGGT TTCGATGTCC
ATGAACCTGG GCTACCTGGT CGGTACAGCC ATCTTCGCGG CGATCTTCCT GGCTGCCGTC
GTCGCGCAGG TCAAGGCCAA AGGCTTCCAT CCCTTCCTGT ACTGGACAAC CATCATCGCC
ACGACCACGG TCGGCACGAC ATTGGCCGAT TTTGCGGATC GATCGCTGGG AATCGGGTAC
GCTGGAGGTT CGAGCTTGCT GCTGGCCTTG CTGCTCGGCT CGCTCTTCGT CTGGCATCGC
ACCCTCGGCT CCGTGTCGGT GAGCACGGTC AGCTCGCCCA AGGCAGAAGC CTTCTACTGG
CTGACGATCA TGTTCTCCCA AACGCTGGGC ACCGCGTTAG GCGACTGGAC AGCCGACACG
GCGGGCTTGG GCTACACGGG TGCGGCCGTC GTGTTCGGCG GGCTGCTCGC GCTGGTCGTG
GCAGCCTACT ACTGGACGAG CGTGTCCCGC ACGCTGCTGT TCTGGGCGGC GTTCATCCTG
ACTCGCCCGC TGGGTGCCGT GGTCGGGGAT TTTCTGGACA AGCCACTGAG CGCGGGTGGT
CTGGCGTTGA GCCGCTATTC GGCATCGGCC GCACTGTTGG CCTTCATGCT GACTGCGATC
CTGCTGTTCA GGCAGAGAGC AGCCAGGACG GCACATTGA
 
Protein sequence
MKTSTEHALA KVPEVTLGFW LIKIAATTLG ETGGDAVSMS MNLGYLVGTA IFAAIFLAAV 
VAQVKAKGFH PFLYWTTIIA TTTVGTTLAD FADRSLGIGY AGGSSLLLAL LLGSLFVWHR
TLGSVSVSTV SSPKAEAFYW LTIMFSQTLG TALGDWTADT AGLGYTGAAV VFGGLLALVV
AAYYWTSVSR TLLFWAAFIL TRPLGAVVGD FLDKPLSAGG LALSRYSASA ALLAFMLTAI
LLFRQRAART AH