Gene Rmet_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3001 
Symbol 
ID4039829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3258542 
End bp3259324 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID637978401 
Producthypothetical protein 
Protein accessionYP_585143 
Protein GI94311933 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.481618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT TGCCCACGAG CAGCACCACT GGCTGGCTCA ATAAAGTCCC GGAAGTCGCG 
CTGTCGTTCT GGATCATCAA GATCATGTCC ACCACGGTGG GCGAGACGGG AGCCGATTTC
CTGGCGGTCA ACGCAGGGTG GGGGCAAGGC GTGACTCGAA CCGTCATGGC TGCCCTGTTG
GCGGCCGCCT TGTTCATGCA GTTGCGCACC CGACGCTATA CCCCTTGGAT TTACTGGCTG
ACGGTGGTAC TGGTCAGCGT GGTCGGCACC CAGATCACCG ATCTGCTGAC CGATGGCCTT
GGCGTCAGCC TGTACATCAG CACCTCGGCG TTCGCCGTTG CGCTCGCCGC GATCTTCTTC
GTCTGGTATC GGATCGAGCG CACCCTGTCC ATTCACGACA TTGTGACGCG CAGCCGGGAG
CTGTTCTATT GGGCTGCCAT CCTCTGCACG TTCGCGCTGG GCACGGCTGC TGGCGATTTG
GCGACCGAGG CATTGGGCTT GGGCTTTACC TGGGGCGCGG TGGCGTTCGG TGTGCTGATT
GGCATCACCT ATACCGCCTG GCGCATGGGC GGCAACGCCG TTCTGACCTT CTGGATCGCC
TACATATTGA CCCGCCCCTT CGGGGCCGCA CTCGGCGACT TGCTGACTCA GGCCAAGACC
TATGGCGGCC TTGGCATGGG TGCCATGTGG ACAAGCGCCT TGTTCCTCAC GGTGATCGTC
ATGCTGGTGG CCGTCGCGCA GATCGGCATG AATGGACGCC GCTCGGCCCA GCTCGTCGAA
TAA
 
Protein sequence
MNKLPTSSTT GWLNKVPEVA LSFWIIKIMS TTVGETGADF LAVNAGWGQG VTRTVMAALL 
AAALFMQLRT RRYTPWIYWL TVVLVSVVGT QITDLLTDGL GVSLYISTSA FAVALAAIFF
VWYRIERTLS IHDIVTRSRE LFYWAAILCT FALGTAAGDL ATEALGLGFT WGAVAFGVLI
GITYTAWRMG GNAVLTFWIA YILTRPFGAA LGDLLTQAKT YGGLGMGAMW TSALFLTVIV
MLVAVAQIGM NGRRSAQLVE