Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2991 |
Symbol | |
ID | 4039819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3247826 |
End bp | 3249364 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637978391 |
Product | integrase catalytic subunit |
Protein accession | YP_585133 |
Protein GI | 94311923 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTCAT ACGCAGACAG GATTCGTGCA GTTGCGCTTT ACATCAAGCT TGGCTTGCGT GTCAGAGCCA CGATTCGCCA GTTGGGGTAC CCAACCAAGA ACGCATTGAA AGGCTGGTAT CAGCACTACC TGAAGCATCA GGATTTGCCA GCAAGCCAAG CTCCAAGAGC ACCAAAATAT TCGCTGCAGC AAAGGCAGGT GGCTATTGCT CATTACCTCG CCCATGATCG CTGTATTGCT GCAACGATGA GGGCTTTGGG TTATCCGGGT CGAGGAACGT TGACTGCGTG GGTTCGGCAA GACTGCCCTG ACACCTGCAA ATCGAGAGTA GGCAGATCTT GGCCGGCTAC AAAGCCTGAT GCCTTGATGT GTGAGGGCGT GGTGCAGCTG TGTGCCCGTC GATCAAGTGC ACAGCAGATT GCGGACAAGT TAGGGGTGTG TAGGGGGACC TTGTACAACT GGAAAAATCA GTTGCTTGGC CCTTGTGCCC CAGCCTCAAT GAAACACAGT CCAAAGCGAT CGCCAGTGTT GGATGAAGCA GCACTCAGGC GCCAAGTTGA ATCATTGCGC CAGGATGTTC GGCGGCTGAA GATAGAACGT GAGCTTCTCA AGCAGGCCCA TGAAATCTTA AAAAATGGGG CTGACATTGA TCTGCATAGG CTGGCAAACA AAGATAAGGC TGTGCTGGTT GAAGCGTTGC ACGGGCAGTA TGAATTGCCA GAACTGCTTT CTCTTGTTGG CCTTGCTAGA AGCTCGTATT TTTACCATCG TGCTCGGCTG AAGCTGGCTG ACAAATACGT TGATTTACGC CGAAGCATCA CAGAGATCTT CGACAACAAC TACCGTTGCT ATGGATATCG CAGGGTGCAG GCATCTCTGC TCAAGGAGTG CACGGGCATC TCAGAGAAGG TGGTTCGTCG GCTGATGAAG CAGGAGGGGT TGATCGTGGC CAAGCCCAAA CGCCGCAGAT ATAACTCCTA CCTTGGAGAG ATAGGTGCCG CCCCGCAAAA CCTCATCAAT CGAGACTTCC GTGCCGCTGC GCCCAATGAG AAGTGGCTCA CCGACATTAC TGAACTCCAG ATTCCTGCTG GCAAGGTTTA CCTGTCGCCA GTCATTGATT GCTTTGACGG GCTGGTGGTG AGCTGGTCGA TTGGGACTCA TCCCAACGCA CATCTCGTCA ACACAATGCT GGATGCGGCC ATTGATGCTG TTCAAGGCAG CGAGAGCCGC CCTGTGATTC ATTCTGATCG TGGAGCTCAC TACCGCTGGC CAGGCTGGCT CTCGAGGGTC CATGATGCAA AGTTGACTCG CTCGATGTCT CGCAAAGGGT GCTCACCAGA CAACGCTGCG TGCGAAGGCT TTTTTGGAAG GCTAAAGATG GAGCTGTTCT ATCCCAACAA CTGGCAATCA ACAACGATTG AGCAGTTCAT TGAAGCTGTC GATGCGTACA TTCGTTGGTA CAACGAAAAA CGTATCAAGG TATCTCTGGG ACGTTTAAGT CCTGTGGAAT ACCGGCACAA ACTTGGCCTA GCCGCATAA
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Protein sequence | MYSYADRIRA VALYIKLGLR VRATIRQLGY PTKNALKGWY QHYLKHQDLP ASQAPRAPKY SLQQRQVAIA HYLAHDRCIA ATMRALGYPG RGTLTAWVRQ DCPDTCKSRV GRSWPATKPD ALMCEGVVQL CARRSSAQQI ADKLGVCRGT LYNWKNQLLG PCAPASMKHS PKRSPVLDEA ALRRQVESLR QDVRRLKIER ELLKQAHEIL KNGADIDLHR LANKDKAVLV EALHGQYELP ELLSLVGLAR SSYFYHRARL KLADKYVDLR RSITEIFDNN YRCYGYRRVQ ASLLKECTGI SEKVVRRLMK QEGLIVAKPK RRRYNSYLGE IGAAPQNLIN RDFRAAAPNE KWLTDITELQ IPAGKVYLSP VIDCFDGLVV SWSIGTHPNA HLVNTMLDAA IDAVQGSESR PVIHSDRGAH YRWPGWLSRV HDAKLTRSMS RKGCSPDNAA CEGFFGRLKM ELFYPNNWQS TTIEQFIEAV DAYIRWYNEK RIKVSLGRLS PVEYRHKLGL AA
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