| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2980 |
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| Symbol | |
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| ID | 4039808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3238831 |
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| End bp | 3240810 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978380 |
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| Product | transketolase |
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| Protein accession | YP_585122 |
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| Protein GI | 94311912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATG CCATCCGCGT GCTTGCCATG GACGCTGTCC AGCAAGCCAA CTCCGGTCAC
CCCGGTGCGC CGATGGGTAT GGCCGATATG GCCGTGGCGC TGTGGGGCCG GCATCTGAAG
CATAACCCCG TCAATCCGCA CTGGCCTGAC CGCGACCGCT TCGTGCTGTC CAACGGCCAC
GGATCGATGC TGATCTACGC GCTGCTGCAC CTGACCGGCT ATGACCTGCC GATCGAGGAA
CTGAAGAACT TCCGCCAGTT GCACAGCAAG ACCGCCGGCC ACCCGGAGTA TGGCATTACC
CCGGGCGTGG AAACCACGAC CGGCCCGCTG GGCCAGGGCA TCACCAATGC CGTCGGCATG
GCGCTGGCCG AGCGCCTGCT GGGCGAGGAA TTCAACCGCC CGGGTTTCGA CATCGTCAAC
CACCACACGT ACGTGTTCAT GGGCGATGGC TGCCTGATGG AAGGCATCAG CCATGAAGCC
TGCTCGCTGG CCGGCACGCT CAAGCTGAAC AAGCTGATCG GCTTCTGGGA TGACAACGGC
ATCTCCATCG ATGGCGACGT GGTGCACTGG TTTGCCGACG ATACGCCGAA GCGTTTCGAA
GCCTATGGCT GGAACGTGAT CCGCGCCGTG GACGGCCACG ACGTGGCTGC CGTCGACAAC
GCCATCGCGC TGGCCAAGGC CAGCGACAAG CCGACCCTGA TCTGCTGCCG CACCGTCATC
GGCAAGGGTG CGCCGAACAA GGCCGGCGGC CACGACGTGC ATGGCGCGCC GCTGGGCGGC
GCCGAAGTGC TGGCCACCCG CGAAGCGCTG GGCTGGACCC ACGCCCCGTT CGAAGTGCCG
CAGGACGCGT ACCTCGCCTG GGACGCGAAG CCGAACGGCC ACGCGCTGGA AAAGGCCTGG
GACGCACTGT TCGACGCCTA CGCCGAAGTG CATCCGTACG AAGCCGGTGA GTTCAAGCGC
CGCGTGCGCG GCGAGCTGCC GGGCGCGTTC GATGCGGCCG TGGACGCCTA CATCGCCAAG
TGCGAGGAGA AGGCCGAGAC GATCGCTACC CGCAAGGCCA GCCAGAACTC GATCGAGGCA
CTGGCGCCGG TACTGCCGGA ACTGCTGGGC GGCTCGGCCG ACCTGACCGG TTCGAACCTG
ACCAACTGGT CGGGCACGCA GGCCGTTCGC TTCGACTCGT GGGGCAACCA CATCAACTAC
GGTGTGCGTG AGTTCGGCAT GAGCGCGATC ATGAACGGCA TCGCGCTGCA TGGTGGCTAC
ATCCCCTACG GCGCCACGTT CCTGACGTTC TCGGACTACA GTCGCAACGC GTTGCGCATG
GCCGCGCTGA TGAAGATCCG CTCGCTGTTT GTGTTCACGC ATGATTCGAT CGGCCTGGGC
GAAGACGGTC CGACCCACCA GTCGATCGAG CACGTGGCCA GCCTGCGTCT GATCCCGAAC
ATGGATGTCT GGCGTACCGC CGACACCACC GAGACTGCAG TGGCCTGGGC GCAGTCGATC
CGCCGCGAGA ACGGTCCGAG CTGCCTGATT TTCAGCCGCC AGAACTTGCC GTTCCAGAAG
CGTGACGATG TCACGCGCGC CAATATCGCG CGCGGTGGCT ACGTGCTGCG CGATGGCACG
AATCCGCGCA AGAAGCGCCC GGATGCCGTG ATTATCGCCA CCGGCTCGGA AGTCGGCCTG
GCCGTGGGCG CCGCCGATGC GCTGGCCGTG GAAGGCGTGC ACGTGCGCGT GGTGTCGGTT
CCGTCGACCT CCGTCTTTGA CAAGCAGGAC GCCGCCTACA AGGCCAGCGT GCTGCCGGCA
GGCGTGCCGC GCATCGCCGT GGAAGCGGGC GTCACCGATT TCTGGTGGAA GTACCAGGTT
CAGGCCGTCG TCGGTATCGA CACGTTCGGC GAATCGGCCC CGGCAGGCGT GCTGTTCAAG
CACTTCGGCT TCACCGTGGA AAACGTGGCC GATACGGTGC GCGCCACGCT CGCCCAGTAA
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| Protein sequence | MADAIRVLAM DAVQQANSGH PGAPMGMADM AVALWGRHLK HNPVNPHWPD RDRFVLSNGH
GSMLIYALLH LTGYDLPIEE LKNFRQLHSK TAGHPEYGIT PGVETTTGPL GQGITNAVGM
ALAERLLGEE FNRPGFDIVN HHTYVFMGDG CLMEGISHEA CSLAGTLKLN KLIGFWDDNG
ISIDGDVVHW FADDTPKRFE AYGWNVIRAV DGHDVAAVDN AIALAKASDK PTLICCRTVI
GKGAPNKAGG HDVHGAPLGG AEVLATREAL GWTHAPFEVP QDAYLAWDAK PNGHALEKAW
DALFDAYAEV HPYEAGEFKR RVRGELPGAF DAAVDAYIAK CEEKAETIAT RKASQNSIEA
LAPVLPELLG GSADLTGSNL TNWSGTQAVR FDSWGNHINY GVREFGMSAI MNGIALHGGY
IPYGATFLTF SDYSRNALRM AALMKIRSLF VFTHDSIGLG EDGPTHQSIE HVASLRLIPN
MDVWRTADTT ETAVAWAQSI RRENGPSCLI FSRQNLPFQK RDDVTRANIA RGGYVLRDGT
NPRKKRPDAV IIATGSEVGL AVGAADALAV EGVHVRVVSV PSTSVFDKQD AAYKASVLPA
GVPRIAVEAG VTDFWWKYQV QAVVGIDTFG ESAPAGVLFK HFGFTVENVA DTVRATLAQ
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