| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2978 |
|---|
| Symbol | |
|---|
| ID | 4039806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3237080 |
|---|
| End bp | 3237697 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637978378 |
|---|
| Product | flavin reductase-like, FMN-binding |
|---|
| Protein accession | YP_585120 |
|---|
| Protein GI | 94311910 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC ACCGACTCGA CGTTGATCTC GCCAAAGCCT ATCGCCTGCT GAATCACGGT
CCGACCGTTC TGGTCAGTGC CGCGCACAAT GGACAACGCA ATATCATGGC GGCGGCATGG
GCCATGCCGC TCGATTTCGC GCCGCCGAAG GTGGCCGTGG TGCTGGACAA GTCCACCTGG
ACGCGCCAGT TGCTTGAAGC AAGCGGCGAA TTCGCGTTGC AGGTTCCCAC CGCCGCCCAG
GTCGATATCA CGCAGGCACT GGGCTCCAGT TCGGGACGGG CCCTGACGGA AAAGCAAGGC
ATCGACAAGT TCGCCGCGTA CGGCTTGCAG ACCTTCGCTG GCAGCGTGAT CGGCGCTCCG
CTGCTCGAAG GCTGCGCGGC GTGGCTGGAA TGCAGGCTAT TGCCCGAACC CGCGATCCAG
AACAGCTACG ATCTGTTTCT CGGCGAAGTG GTCGCAGCCC ACGCCGACGG CCGCGTCTTC
AGCAATGGCC GCTGGCACTT TACCGGCCAA GACGACCTGC GCACGATCCA CCATGTCGCG
GGTGGCCACT TCCTCGTCGA TGGCGATGCT ATCGATGCGC GGCCGCTAAC GCCACCAGTC
ACCCCACCTG CCGCCTGA
|
|---|
| Protein sequence | MASHRLDVDL AKAYRLLNHG PTVLVSAAHN GQRNIMAAAW AMPLDFAPPK VAVVLDKSTW
TRQLLEASGE FALQVPTAAQ VDITQALGSS SGRALTEKQG IDKFAAYGLQ TFAGSVIGAP
LLEGCAAWLE CRLLPEPAIQ NSYDLFLGEV VAAHADGRVF SNGRWHFTGQ DDLRTIHHVA
GGHFLVDGDA IDARPLTPPV TPPAA
|
|---|
| |