| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2948 |
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| Symbol | |
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| ID | 4039776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3205205 |
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| End bp | 3206455 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978348 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_585090 |
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| Protein GI | 94311880 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA CCATTGAACC ATCCAAGGAC ACCGAACTGC CTCTCGACGG CGTGCGCGTG
CTTGACCTGT CCCGCGTCTT CGCTGGCCCG CTGTGCGGGC AAGTCCTGGC CGACTTCGGT
GCCGAGGTGG TCAAGGTGGA ACATCCCGGC CGTGGCGATG ACACCCGTGA TTGGGGGATG
CGCATTGGCA AGACGGAGAC GACTTACTAC AACAGCATGA ACCGCAACAA GCGGTCCATC
ACGCTGGATC TGCAGAGCAA GGAAGGCGTG CAGATCGTCT ACGAACTGCT GCCGAAGTTC
GACGTCGTCA TCCACAACTT CAAGACGGGC GGCGCCGAGA AGCTGGGCCT GGGCTACGAG
CAGCTCAAGG CCATCAAGCC TGACCTCATC TACTGCGCCA TTTCTGGATA CGACACCAGC
GGCCCGGAAG CGAAACGCCC CGGCTACGAC CTCGTCATCC AGGGCGAGGC CGGCCTCATG
GCGCTCAATG GCGAGGCCGA TCAGCCGCCG TTGAAATTCG GCGTTGCGGT CGTCGACCTC
ATGACCGGCA TGTATGCGGC ACAAGCCGTA CTGGCCGCCC TCTTCCGCCG CGAGCGAAAG
GGCCTGGGCC AACTGATCGA GATGGCGCTG TACGACTGCG GCGTGATGGT GACGGGCTAC
TACGGCCTGG ATGCCATGCT GCTGGGGCGC GACCCGGCAC GCTACGGGAA CGCCCATCCG
TCCATCGTGC CCTACGGCAT GTTCGAGGCT GCCGATGGTC CACTGATCAT CGCGGTGGGA
AACAACAACC AGTTCGACAA GTTCTGCCGC CAGGTCATCG AGCGCCCCGA TATCGTCGAG
GATCCACGCT ACGCCACGAA CGTCGAGCGC GCGAAGAACC GCGTCACCCT GACACCGCTG
ATCACGGGTC TGATCCATGC GTTTCCCCGC GACCTTCTGC TGGAACGCAT GACCGCTTGC
GGTATCCCGT GCGGCAGGGT GGCCGGGCTG CACGAGGCAC TGACCAGCGA ACGGACTCGC
AGGGGTGGGC TGATGCGTGA GATGCCGCAT CCGGTGGCAG GCACGACGCA TGTATTTGCG
CCGCCGTACC GTCTGGACGG AAAGCGCCCG CCGATTCGCA ATGCACCGCC GACGCTTGGC
GAGGGCACGC GCGCGGTATT GCAGAGTCTT CTGGATATGA GTGACGCGCA ACTGCAAGAA
CTGCAGGCGC TCGGCGTTCT CACACTGCCC GAGGCACCTG CCAACTCCTG A
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| Protein sequence | MQQTIEPSKD TELPLDGVRV LDLSRVFAGP LCGQVLADFG AEVVKVEHPG RGDDTRDWGM
RIGKTETTYY NSMNRNKRSI TLDLQSKEGV QIVYELLPKF DVVIHNFKTG GAEKLGLGYE
QLKAIKPDLI YCAISGYDTS GPEAKRPGYD LVIQGEAGLM ALNGEADQPP LKFGVAVVDL
MTGMYAAQAV LAALFRRERK GLGQLIEMAL YDCGVMVTGY YGLDAMLLGR DPARYGNAHP
SIVPYGMFEA ADGPLIIAVG NNNQFDKFCR QVIERPDIVE DPRYATNVER AKNRVTLTPL
ITGLIHAFPR DLLLERMTAC GIPCGRVAGL HEALTSERTR RGGLMREMPH PVAGTTHVFA
PPYRLDGKRP PIRNAPPTLG EGTRAVLQSL LDMSDAQLQE LQALGVLTLP EAPANS
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