Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2947 |
Symbol | secF |
ID | 4039775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3203941 |
End bp | 3204915 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978347 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_585089 |
Protein GI | 94311879 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTT TCCGCATCAA GCGCGACATT CCGTTCATGA AGCACGCGTT GATCTTCAAC GTGGTGTCCT TCCTGACGTT TGCCGCCGCT GTTTTCTTCC TCTGGCACAA GGGCCTGCAC CTGTCGATCG AATTCACCGG CGGCACGGTG ATGGAGGTCA ACTACCAGCA GGCCGTCGAT CTCGAGAAGG TCCGTGGCCA GGTCAGCAAG CTCGGCTACT CCGATGTGCA GGTGCAGAAT TTCGGCACCT CGCGCGACGT GATGATCCGC CTGCCGCTGC AGAAGGGCCC GGACGGCAAG CAGGTGACCT CCGCGCAGCA GAGCGAGCAG GTCATGGGCG CGCTGACGGC GGCCTCGCCT GACGTCAAGC TGCAACGCGT GGAGTTCGTC GGCCCGCAGG TGGGCAAGGA ACTGGCCACG GACGGCCTGC TGGCCCTGCT GTGCGTGGTG GCCGGTATCG TGATCTACCT GTCGTTCCGC TTCGAATGGA AGTTCGCGGT CGCCGGTATC ATCGCCAACC TGCACGATGT GGTGATCATC CTGGGCTTCT TCGCCTTCTT CCAGTGGGAG TTCTCGCTCT CGGTGCTGGC GGCGATCCTG GCGGTGCTCG GCTACTCCGT GAACGAGTCG GTGGTGATTT TCGACCGGAT CCGCGAAGCC TTCCGCAAGT ACCGCAAGAT GACTACGCAT GAAGTCATCG ACCACGCGAT CACCAGCACG ATGTCGCGGA CCATCATCAC CCACGGCTCG ACCGAAATGA TGGTGCTGTC GATGTTCTTC TTCGGCGGCC CGACGCTGCA CTACTTCGCC CTGGCCCTGA CTGTGGGTAT TCTGTTCGGT ATCTACTCGT CGGTGTTCGT GGCCGCGGCG CTGGCGATGT GGCTCGGCGT GAAGCGCGAA GACCTCGTCA AGGGCGACAA GAAAGGCGGC GACGTAACCG ACCGCAACGA CCCGAACTTC GGCGCGCAAG CTTGA
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Protein sequence | MEFFRIKRDI PFMKHALIFN VVSFLTFAAA VFFLWHKGLH LSIEFTGGTV MEVNYQQAVD LEKVRGQVSK LGYSDVQVQN FGTSRDVMIR LPLQKGPDGK QVTSAQQSEQ VMGALTAASP DVKLQRVEFV GPQVGKELAT DGLLALLCVV AGIVIYLSFR FEWKFAVAGI IANLHDVVII LGFFAFFQWE FSLSVLAAIL AVLGYSVNES VVIFDRIREA FRKYRKMTTH EVIDHAITST MSRTIITHGS TEMMVLSMFF FGGPTLHYFA LALTVGILFG IYSSVFVAAA LAMWLGVKRE DLVKGDKKGG DVTDRNDPNF GAQA
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