Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2944 |
Symbol | tgt |
ID | 4039772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3200170 |
End bp | 3201300 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978344 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_585086 |
Protein GI | 94311876 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.765199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAATT TCGAACTGCT GACCACTGAT GGCAACGCCC GCCGTGGCCG CGTCACGCTG AACCACGGCG TTGTGGAAAC GCCGATCTTC ATGCCCGTAG GCACCTACGG GTCGGTCAAG GCAATGTCGC CGCTCGAACT CAACGAGATC GGCGCGCAAA TCATCCTCGG CAATACGTTC CACCTGTGGC TGCGCCCGGG GCTCGACGTC GTTGACACCC ACGCCGGCCT GCACAAGTTC ATCGGCTGGG ACAAGCCGAT CCTGACCGAT TCGGGCGGTT TTCAGGTGTT TTCGCTGGGA GAACTGCGCA AGATCACCGA GGAAGGTGTC ACGTTCGCAT CGCCGGTCAA TGGCGACAAG CTGTTCCTGT CGCCCGAGAT CTCGATGCAG ATCCAGCGCA CGCTGAACTC AGACATCGTG ATGCAATTCG ACGAGTGCAC GCCGTACGAG ATCGACGGCC GTCCCGCCAC GCACGACGAG GCCGCCCGCT CCATGCGGAT GAGCCTGCGC TGGGCCAAGC GTTCGCGCGA CGAGTTCGAC CATCTGGCCA ATCCCAACGC GCTGTTCGGC ATCGTGCAGG GCGGCATGTT CGAGGACCTG CGCGACGAAT CACTGGCGGG CCTGTCGGAA CTGGACTTCC ATGGTTACGC GATCGGCGGC CTGTCGGTTG GTGAGCCGAA GGAAGACATG ATGCGGGTGC TGGAGCACGT TGGTCCCCGC TTGCCGGCGC ACAAGCCGCA CTATCTGATG GGCGTTGGCA CGCCCGAGGA CCTGGTGGCC GGCGTGGCGC ACGGCGTCGA CATGTTCGAC TGCGTGATGC CGACCCGCAA CGCCCGCAAC GGCTGGCTGT TCACGCGCTT TGGTGACGTG AAGATCCGCA ACGCGGCGCA CCGCAACGAC CCGCGCCCGC TGGACGAACA GTGCGGCTGC TACACCTGCC GTAACTTCTC CCGGGCCTAC CTGCACCACC TGCACCGCGT GGGCGAAATC CTTGGCGCGC GCCTGAACAC GATCCACAAC CTCTATTACT ACCTGGAACT GATGCGCGAG ATGCGCACGG CCATCGAAGA GCACCGCTTC GAGGCATTCC GCCGCCAGTT CGCCGAAAAT CGCGCGCGCG GCACACGCTG A
|
Protein sequence | MLNFELLTTD GNARRGRVTL NHGVVETPIF MPVGTYGSVK AMSPLELNEI GAQIILGNTF HLWLRPGLDV VDTHAGLHKF IGWDKPILTD SGGFQVFSLG ELRKITEEGV TFASPVNGDK LFLSPEISMQ IQRTLNSDIV MQFDECTPYE IDGRPATHDE AARSMRMSLR WAKRSRDEFD HLANPNALFG IVQGGMFEDL RDESLAGLSE LDFHGYAIGG LSVGEPKEDM MRVLEHVGPR LPAHKPHYLM GVGTPEDLVA GVAHGVDMFD CVMPTRNARN GWLFTRFGDV KIRNAAHRND PRPLDEQCGC YTCRNFSRAY LHHLHRVGEI LGARLNTIHN LYYYLELMRE MRTAIEEHRF EAFRRQFAEN RARGTR
|
| |