| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2942 |
|---|
| Symbol | |
|---|
| ID | 4039770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3196768 |
|---|
| End bp | 3198981 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637978342 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_585084 |
|---|
| Protein GI | 94311874 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGCCA GGCTTCGCCT GCTTGCCCAT GTTGCCGCCC ATATTCCCGC GCTGATGCCA
GGCTCCGCCA CCGAACCGAT CGACGAACCC GCCTCCGCCG CCAGGAAATC CGCCAAGGCT
GCCGATGCCA AGCCGTCCAC GGCCGCAGCG CGGCTGGCCA AGCTCGGCCT GCGACGCAGT
GTCGACCTCG TGCTGCACCT GCCGCTCCGC TACGAGGACG AAACCACGCT CGAGCCGATC
CGCGACGCGA TCCACCGTGC GGGTATTGGC CTGCCGGCGC AGATCGAAGG CGAAGTGATC
TCGAACGAGG TGACGTTCCG CCCGCGCCGC CAGCTTGTGG TCAAGGTGGC CGATGAAACC
GGCGAACTGA CGCTGCGTTT CCTCAATTTC TACGGCGGCC AGACCAAGCA GATGGCCGAA
GGCACGCGTC TGCGCGTGCG CGGCGAGATT CGCGGCGGCT TCTTTGGCGC CGAGATGGTC
CATCCAACCG TGCGGGCGGT GACGCCGGGC GAGCCGTTGC CGGACCGCCT GACGCCGGTC
TATCCGGCCA CCGCCGGGAT TTCTCAGGCT TACCTGCGCA AGGCCATCGG CGGGGCGATG
CAGCGCACGC CGATGCCGGA AACCCTGCCC CAGGCGGTGC TGCGCGGGCC GCTGGCGCAG
TTGAAGCTGC CGCCGCTGAT CGATTGCCTG CGCCTGCTGC ACAACCCGCC ACAGCAGGAA
AGCGAGGCCG CGCTGGCCGA TCGCTCGCAT CCGGCGTGGG TGCGGATCAA GTTCGATGAA
CTGCTCGCGC AGCAGATTTC GCTGCGCCGC TCGCAGGCCG CGCGCAAGGA GAAGAACGCG
CCGTCGATGC CGCGCCGTGC GGGTGGCTTG CTGACCAGCT TCCTTGGCGC GCTGCCGTTC
CGCCTGACGG GCGCGCAGCA GCGGGTGGTC GAGGAAATCG CCGCCGACAT GGCCCGTCCG
CACCCCATGC ATCGTCTGCT ACAGGGCGAC GTGGGCAGCG GCAAGACGAT CGTCGCCGCG
CTGGCCGCGT GCCAGGCGAT CGACGCCGGC TATCAGGCCG CGTTGATGGC GCCGACCGAA
ATCCTGGCCG AGCAGCATTT CCGCAAGTTG TCCGCATGGC TCGAACCGCT TGGCGTGCCT
GTGGTCTGGT TGGCGGGCAG TCTGAAGGCG AAGGAGAAGC GCGAGGCCGT GGCGCGCGCC
GAATCAGGCG AGGCGAAGCT CGTGATCGGC ACCCATGCGC TGATCCAGGA CACCGTTCGG
TTCGCCCGGC TCGGTCTGGC CGTGGTCGAC GAGCAGCATC GCTTCGGCGT TGCCCAGCGG
CTGGCGCTGC GTGGCAAGGC CGGGGAAGCG GACCAGCCGG GCGAGCCGGC GCGACCGGCG
GAGGAAAAAG TGGTGCCGCA CCAGCTCATG ATGTCGGCCA CGCCGATCCC GCGCACGCTG
GCGATGACCT ACTACGCCGA CCTCGATGTG TCGGTGATCG ACGAATTGCC GCCCGGCCGC
ACGCCAATCG TCACGCGGCT GGTCAATGAC GCGCGCCGCG ACGAGGTGAT CGAGCGCGTG
CACCATGCGG CCGCCGAAGG GCGCCAGGTC TACTGGGTGT GTCCGCTGAT CGAGGAAAGC
GAGGCGCTGC AGCTCCAGAC GGCAGTCGAG ACGTACGAAA CGCTGGTTGC GGCGCTGCCC
GATCTGCGTG TCGGGCTGGT TCACGGGCGG CTGCCACCGG CCGAGAAGGC CGCCGTGATG
GACGATTTCA CCGCCAACCG GCTGCAGGTG CTGGTGGCCA CCACCGTGAT CGAAGTGGGC
GTCGACGTTC CCAATGCATC GCTGATGGTG ATCGAACACG CCGAACGTTT CGGGCTGGCG
CAACTCCACC AGTTAAGGGG GCGCGTGGGG CGGGGAAGCG CCGAGTCGGT CTGCCTGCTG
ATGTACCAGG CGCCGCTGTC GCCCACAGCG CGCGAGCGGC TGGCGACGAT GCGCGAAACC
ACCGACGGCT TCGAGATCGC ACGGCGCGAC CTGCAGATTC GCGGCCCCGG TGAATTCCTG
GGTGCCCGGC AGTCGGGCGA GGCGATGCTG CGATTCGCCG ACCTCGAAAC CGATGCCTGG
CTCGTCGATT ACGCCCAGGA GGCCGCCGAG CTGATGTTGG AACGGTACCC GGAAGCGGTG
GAGGCGCATC TGTCGCGCTG GCTGGGTGGC CGGGAGCACT TCCTGAAGGC CTGA
|
|---|
| Protein sequence | MGARLRLLAH VAAHIPALMP GSATEPIDEP ASAARKSAKA ADAKPSTAAA RLAKLGLRRS
VDLVLHLPLR YEDETTLEPI RDAIHRAGIG LPAQIEGEVI SNEVTFRPRR QLVVKVADET
GELTLRFLNF YGGQTKQMAE GTRLRVRGEI RGGFFGAEMV HPTVRAVTPG EPLPDRLTPV
YPATAGISQA YLRKAIGGAM QRTPMPETLP QAVLRGPLAQ LKLPPLIDCL RLLHNPPQQE
SEAALADRSH PAWVRIKFDE LLAQQISLRR SQAARKEKNA PSMPRRAGGL LTSFLGALPF
RLTGAQQRVV EEIAADMARP HPMHRLLQGD VGSGKTIVAA LAACQAIDAG YQAALMAPTE
ILAEQHFRKL SAWLEPLGVP VVWLAGSLKA KEKREAVARA ESGEAKLVIG THALIQDTVR
FARLGLAVVD EQHRFGVAQR LALRGKAGEA DQPGEPARPA EEKVVPHQLM MSATPIPRTL
AMTYYADLDV SVIDELPPGR TPIVTRLVND ARRDEVIERV HHAAAEGRQV YWVCPLIEES
EALQLQTAVE TYETLVAALP DLRVGLVHGR LPPAEKAAVM DDFTANRLQV LVATTVIEVG
VDVPNASLMV IEHAERFGLA QLHQLRGRVG RGSAESVCLL MYQAPLSPTA RERLATMRET
TDGFEIARRD LQIRGPGEFL GARQSGEAML RFADLETDAW LVDYAQEAAE LMLERYPEAV
EAHLSRWLGG REHFLKA
|
|---|
| |